| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is fadI [H]
Identifier: 148260260
GI number: 148260260
Start: 1400297
End: 1401583
Strand: Reverse
Name: fadI [H]
Synonym: Acry_1257
Alternate gene names: 148260260
Gene position: 1401583-1400297 (Counterclockwise)
Preceding gene: 148260261
Following gene: 148260259
Centisome position: 41.35
GC content: 71.17
Gene sequence:
>1287_bases ATGCTCACCGCCCCCTCGCTCCGCCGCGTCGCGATCATCGGCGGCACGCGCATTCCCTTCGCCCGCGCCAACACCGCCTA TGCCGAGGCCTCCAACCAGGACATGCTGACCGCCGCCCTGCAGGGCCTGGTCGACCGCTACCGCCTCGGCGGCGAACGGC TCGGCGAGGTCGTCGCCGGCGCCGTGCTCAAGCACAGCCGCGACTTCAACCTCACCCGCGAGGCGGTGCTCTCCACCACG CTCGGCCACGACACCCCGGCCTATGACATCCAGCAGGCCTGCGGCACCGGGCTCGAAGCGGCCCTGCTGGTCGCCAGCAA GATCGCCCTCGGCCAGATCGACGCCGGCATCGCCGGCGGGGTCGACACCACGTCCGACGCGCCGATCGCGCTCAACGAAA AGCTGCGCAAGCTGCTGCTCAAGGCCAATCGCGGCCGCACCACCGCCGAGAAGGTGAAAACCCTCGCCGGCATCCGCCCG TCCATGCTGCTCCGCCCGGCGCTGCCGCGCAACGCGGAGCCGCGCACCGGCCTGTCGATGGGCGAGCATTGCGAGCAGAT GGCGAAACGCTGGCGCATCCCCCGCGCCGCCCAGGACGAGCTCACCGTCGCCAGTCATCGCAACCTCGCCGCCGCCTACG GACGCGGCTTCTTCAACGACCTCATCGTGCCGTTTCGCGGCCTGACGAAGGACGGCAATCTCCGCCCCGACATCGACCCG GCGAAGCTCGCGGCGATGCCGCCGGTGTTCGACCGCAAGGGCGGCACCATGACCGCCGCCAACTCCACCCCGCTGACCGA TGGCGCGGCCGTCGTCCTGCTCGCCTCCGAGGAATGGGCGCAGGCGCGCAACCTTCCGGTTCTCGCCTATCTGCGCACCG GCGAGGCGGCGGCGGTCGATTTCGTCGATGGCGAGGAAGGCCTGCTGATGGCGCCGGCCTATGCCGTGCCGCGGATGCTC GGCAAGCTCGGCATCACCTTGCAGGATTTCGATTTCTACGAAATCCACGAGGCCTTCGCCGCCCAGGTGCTCTCGACCCT GGCCGCCTGGGAAAGCCCCGACTACGCGCGCGACCGCCTCGGGCTCGACGCCCCGCCCGGCGCCATCGACCGCGCGCGGC TCAACGTCAACGGCAGCTCGCTCGCCACCGGCCACCCCTTCGCCGCGACCGGCGGGCGGATTCTGGCGACGCTGGCGAAG ATGCTGGCCGAAAAGGGGGCCGGACGCGGCCTGATCTCGATCTGTGCCGCGGGCGGGCAGGGTGTCGTCGCGGTGGTAGA GCGCTGA
Upstream 100 bases:
>100_bases CCGGCGGCACCCGCCTGATCGAACTGCGCGACCGGCGCGAGACGAAGCCGCATCTGCGCGGCACGCTCGCCTTCCGCGCC GCCGCCTGATGGAGACATCA
Downstream 100 bases:
>100_bases GGGAAAGTGATATGACCGATACAATGCAGGACAGTGTCGAAACCGACGGAATCTGGTTCGCCTCCTACCGCGAAGGGGTG CCGCACGACATTGGCGACGA
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: ACSs; Acetyl-CoA acyltransferase; Acyl-CoA ligase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta [H]
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MLTAPSLRRVAIIGGTRIPFARANTAYAEASNQDMLTAALQGLVDRYRLGGERLGEVVAGAVLKHSRDFNLTREAVLSTT LGHDTPAYDIQQACGTGLEAALLVASKIALGQIDAGIAGGVDTTSDAPIALNEKLRKLLLKANRGRTTAEKVKTLAGIRP SMLLRPALPRNAEPRTGLSMGEHCEQMAKRWRIPRAAQDELTVASHRNLAAAYGRGFFNDLIVPFRGLTKDGNLRPDIDP AKLAAMPPVFDRKGGTMTAANSTPLTDGAAVVLLASEEWAQARNLPVLAYLRTGEAAAVDFVDGEEGLLMAPAYAVPRML GKLGITLQDFDFYEIHEAFAAQVLSTLAAWESPDYARDRLGLDAPPGAIDRARLNVNGSSLATGHPFAATGGRILATLAK MLAEKGAGRGLISICAAGGQGVVAVVER
Sequences:
>Translated_428_residues MLTAPSLRRVAIIGGTRIPFARANTAYAEASNQDMLTAALQGLVDRYRLGGERLGEVVAGAVLKHSRDFNLTREAVLSTT LGHDTPAYDIQQACGTGLEAALLVASKIALGQIDAGIAGGVDTTSDAPIALNEKLRKLLLKANRGRTTAEKVKTLAGIRP SMLLRPALPRNAEPRTGLSMGEHCEQMAKRWRIPRAAQDELTVASHRNLAAAYGRGFFNDLIVPFRGLTKDGNLRPDIDP AKLAAMPPVFDRKGGTMTAANSTPLTDGAAVVLLASEEWAQARNLPVLAYLRTGEAAAVDFVDGEEGLLMAPAYAVPRML GKLGITLQDFDFYEIHEAFAAQVLSTLAAWESPDYARDRLGLDAPPGAIDRARLNVNGSSLATGHPFAATGGRILATLAK MLAEKGAGRGLISICAAGGQGVVAVVER >Mature_428_residues MLTAPSLRRVAIIGGTRIPFARANTAYAEASNQDMLTAALQGLVDRYRLGGERLGEVVAGAVLKHSRDFNLTREAVLSTT LGHDTPAYDIQQACGTGLEAALLVASKIALGQIDAGIAGGVDTTSDAPIALNEKLRKLLLKANRGRTTAEKVKTLAGIRP SMLLRPALPRNAEPRTGLSMGEHCEQMAKRWRIPRAAQDELTVASHRNLAAAYGRGFFNDLIVPFRGLTKDGNLRPDIDP AKLAAMPPVFDRKGGTMTAANSTPLTDGAAVVLLASEEWAQARNLPVLAYLRTGEAAAVDFVDGEEGLLMAPAYAVPRML GKLGITLQDFDFYEIHEAFAAQVLSTLAAWESPDYARDRLGLDAPPGAIDRARLNVNGSSLATGHPFAATGGRILATLAK MLAEKGAGRGLISICAAGGQGVVAVVER
Specific function: Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI4504327, Length=435, Percent_Identity=35.4022988505747, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI4557237, Length=435, Percent_Identity=27.1264367816092, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI4501853, Length=433, Percent_Identity=29.5612009237875, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI167614485, Length=432, Percent_Identity=27.3148148148148, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI148539872, Length=429, Percent_Identity=27.972027972028, Blast_Score=150, Evalue=2e-36, Organism=Escherichia coli, GI1788683, Length=411, Percent_Identity=38.6861313868613, Blast_Score=265, Evalue=5e-72, Organism=Escherichia coli, GI87082165, Length=434, Percent_Identity=31.1059907834101, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1788554, Length=431, Percent_Identity=30.1624129930394, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1787663, Length=434, Percent_Identity=29.7235023041475, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI48994986, Length=434, Percent_Identity=28.3410138248848, Blast_Score=135, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17551802, Length=432, Percent_Identity=33.7962962962963, Blast_Score=241, Evalue=4e-64, Organism=Caenorhabditis elegans, GI133906874, Length=429, Percent_Identity=26.8065268065268, Blast_Score=140, Evalue=9e-34, Organism=Caenorhabditis elegans, GI17535921, Length=434, Percent_Identity=25.5760368663594, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI25147385, Length=435, Percent_Identity=25.5172413793103, Blast_Score=125, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6322031, Length=431, Percent_Identity=29.9303944315545, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6325229, Length=437, Percent_Identity=27.6887871853547, Blast_Score=152, Evalue=8e-38, Organism=Drosophila melanogaster, GI17137578, Length=427, Percent_Identity=36.5339578454333, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24655093, Length=427, Percent_Identity=28.5714285714286, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI24640423, Length=436, Percent_Identity=26.1467889908257, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI17648125, Length=391, Percent_Identity=29.156010230179, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012806 - InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.16 [H]
Molecular weight: Translated: 45233; Mature: 45233
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTAPSLRRVAIIGGTRIPFARANTAYAEASNQDMLTAALQGLVDRYRLGGERLGEVVAG CCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH AVLKHSRDFNLTREAVLSTTLGHDTPAYDIQQACGTGLEAALLVASKIALGQIDAGIAGG HHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC VDTTSDAPIALNEKLRKLLLKANRGRTTAEKVKTLAGIRPSMLLRPALPRNAEPRTGLSM CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCH GEHCEQMAKRWRIPRAAQDELTVASHRNLAAAYGRGFFNDLIVPFRGLTKDGNLRPDIDP HHHHHHHHHHCCCCCCCCCCEEHHHCCCHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCH AKLAAMPPVFDRKGGTMTAANSTPLTDGAAVVLLASEEWAQARNLPVLAYLRTGEAAAVD HHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHCCCCEEEEEECCCEEEEE FVDGEEGLLMAPAYAVPRMLGKLGITLQDFDFYEIHEAFAAQVLSTLAAWESPDYARDRL EECCCCCEEECCHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHC GLDAPPGAIDRARLNVNGSSLATGHPFAATGGRILATLAKMLAEKGAGRGLISICAAGGQ CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHEEECCCC GVVAVVER CEEEEECC >Mature Secondary Structure MLTAPSLRRVAIIGGTRIPFARANTAYAEASNQDMLTAALQGLVDRYRLGGERLGEVVAG CCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH AVLKHSRDFNLTREAVLSTTLGHDTPAYDIQQACGTGLEAALLVASKIALGQIDAGIAGG HHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC VDTTSDAPIALNEKLRKLLLKANRGRTTAEKVKTLAGIRPSMLLRPALPRNAEPRTGLSM CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCH GEHCEQMAKRWRIPRAAQDELTVASHRNLAAAYGRGFFNDLIVPFRGLTKDGNLRPDIDP HHHHHHHHHHCCCCCCCCCCEEHHHCCCHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCH AKLAAMPPVFDRKGGTMTAANSTPLTDGAAVVLLASEEWAQARNLPVLAYLRTGEAAAVD HHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHCCCCEEEEEECCCEEEEE FVDGEEGLLMAPAYAVPRMLGKLGITLQDFDFYEIHEAFAAQVLSTLAAWESPDYARDRL EECCCCCEEECCHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHC GLDAPPGAIDRARLNVNGSSLATGHPFAATGGRILATLAKMLAEKGAGRGLISICAAGGQ CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHEEECCCC GVVAVVER CEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA