| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is yhfK [C]
Identifier: 148260211
GI number: 148260211
Start: 1342448
End: 1344514
Strand: Reverse
Name: yhfK [C]
Synonym: Acry_1207
Alternate gene names: 148260211
Gene position: 1344514-1342448 (Counterclockwise)
Preceding gene: 148260212
Following gene: 148260210
Centisome position: 39.67
GC content: 72.81
Gene sequence:
>2067_bases ATGACGCCGGCTGATGCGCCCTCCCGGCTGACCGATCGTGCAGGGTTGCCGCTGACGGGCGGCAGCCTCGCGCTGAACTT CCGCGCCGTCTCCCTGCTCGAGGGAATTCGTGCCGCGATTGCGGTCGCCGGCACGCTCGCGGCGGGCGCCCTGCTGGACC AGCCGCAACTCGCCCTCGCGGCGCTCGGCGCGCTGCTCGCCTGCTTTACCGATCCAGGCGGCGCGCTGCCGGCCCGCCTG CCGCCGATGCTGATCTTCGGCGTGGCCGGCGCGATCTGCCTCGGAGGTTTCGGGCTGCTGGACGGCGCCAGCCCGTTGCT TGCCATTCCCGTCGCGGGGCTTGCCATCTTCTGCTGCAGCCTTGCCCGCATCTACGGGCAGGGCGGATTGCTGACCGGCA ACCTGCTTGCCGTCACGATCGTGCTGGCGCTCGACATGCCGACCGGCTCGCCGGTCGCCGCATTGCATGCGGCCTTCGGC TTCTGGGCCGGCGCCGCGGAAGCCGCGATCCTGACCCTTGCGCTCTGGCGCATCCGTCCGTTCGGCCCGGCGCGCGCGGC CTTGGCGGATGCGGCGCTCGCGCTGGCCGAGCTCGCCCGCGATCTTGCCGAACGCGAGGCCGATGCCGGCGGCGAGACCG GGTTCGATTTGCACGCCCGCGGCCATCGCCGGGCCGTGCGCGAAGCGATCGAGCGCGCCCGCGCCGTCACCCAGGCCACC CTGCGCCGGCGCGGCGTGGCAAGCCAGCGGGCGAACGCGCTCGTTCTTCGCCTGGCCACTTTTGACCAGCTGTTCGGCGC GCTGATCGCGCTGGGTGAGGAAATGGCCGCGCGCGGCGCCGACGATCCCGCCGCTCGCCGCGCCCTCGCCGGCATCGGCG ACCTGCTGGGAGCGATGGCGCCCGAACTCGAAGCCGGCCGCACGCTGGATACGGCGCCGCTCCGTGCCGGGCTGGAGGCT CTGCGCGGCACGGTCTCCTCGGCGAAGGGCGATCCCGCGCTGCGCCGTCCGCTGGCCGCCGCGCTCGACCGCCTTTCGGT GCTCATCACCGTCTCGAATGCGCCGGGCGTCACGGCCGCCGACGAGATCGTGCCGCCCGACCTGATGGCCACGATCCTTG GCCCGTTGCGGTCCAATCTCAGCCTGGCCTCGGTGCCGCTGCGCCACGCCCTGCGCTCCATGCTGGTCGCAATCCCGGCG CTCGCCTTCGTCGCCTGGCTCGGCAACCCGTTCGGCCATTGGCTCGCCATCACCGTGATCCTTGTGCTGCAGCCGCATTT CTCGGCCACATGGATCCGCGCGATCGAACGCGTCGGCGGTACCGCGGCGGGCGGGCTGGTTGCCGCCGCCATCGGCCTGC TGGTTCACACCAGGCTGGAACTCGCGGTGGCGATGGTGCCGCTCACGCTGTTCGCCTTCGCCGTGCGCGGGGTGAACTAC AGCGCCTGGGTCGTTCTGCTCACGCCGATGATCGTGCTGCTGATCGAGCAGATCGATCCGGGGGCGAATCAGTGGGTCGT CGCCGCCTCGCGCGTCGGTTTCACGCTGGCCGGCGGCATCCTCGCGGTTGCCGCCAATCTCGTGCTCTGGCCGAGTTTCG AGGGTAACCGGCTTGGCGCGGCGCGGCGCGACGCCATTGCCGCGCACCGCACCTATCTCGTCGCGACCTTCGCGCATCTG ACCGCCGACGCGCCGCCGCCTGAGGCCGCGCGCCGGCAGGCGGGGCTGGCCAGCAACAATCTCGAAGCCTCGATTGCGCG GGTGATGATGGAGCCGCATCGCGACGACGACCCGCTGCTGCGCGCCGCGATCGTCACCGATGCCGCCTTGCGCCGCACGG CCGGCAGGCTGGCGGCACTCGCCCTCGAGCCCCGCCCGGAGGCAGCGGCCCGGGTCGGCTGCCGGGCCTGGGCCGAGGCG CTCGCCGCCTGGTTCGATCCCGACCTGCCGGACCCGCCGCCCTTGCCGCCGCCGGTGGGCCTGCCCGCGATCGATGACGG GCTTGCGCGGCTGGCCCGGCAGGCGGAACTTGTCCGTGAACCCGTGACTTCGGAGACCATCGCATGA
Upstream 100 bases:
>100_bases ACGGAAACGCGGCTCGCCGAATGGCTCGGCGCGCGCGGCCAGGCCGGAAGGCTGCCGCCGACGGGCTTCCCGCGGTCGGG CACGTTCGGCCCGCCGGACG
Downstream 100 bases:
>100_bases GCGATCAAGGCCCAACCCGCCGCAATGGTGGCGTGGTGCGCATTATCGAGGCGCTGCTGTTTGGCGGGCGCTGGCTGCTG GCGCCGCTCTATCTCGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MTPADAPSRLTDRAGLPLTGGSLALNFRAVSLLEGIRAAIAVAGTLAAGALLDQPQLALAALGALLACFTDPGGALPARL PPMLIFGVAGAICLGGFGLLDGASPLLAIPVAGLAIFCCSLARIYGQGGLLTGNLLAVTIVLALDMPTGSPVAALHAAFG FWAGAAEAAILTLALWRIRPFGPARAALADAALALAELARDLAEREADAGGETGFDLHARGHRRAVREAIERARAVTQAT LRRRGVASQRANALVLRLATFDQLFGALIALGEEMAARGADDPAARRALAGIGDLLGAMAPELEAGRTLDTAPLRAGLEA LRGTVSSAKGDPALRRPLAAALDRLSVLITVSNAPGVTAADEIVPPDLMATILGPLRSNLSLASVPLRHALRSMLVAIPA LAFVAWLGNPFGHWLAITVILVLQPHFSATWIRAIERVGGTAAGGLVAAAIGLLVHTRLELAVAMVPLTLFAFAVRGVNY SAWVVLLTPMIVLLIEQIDPGANQWVVAASRVGFTLAGGILAVAANLVLWPSFEGNRLGAARRDAIAAHRTYLVATFAHL TADAPPPEAARRQAGLASNNLEASIARVMMEPHRDDDPLLRAAIVTDAALRRTAGRLAALALEPRPEAAARVGCRAWAEA LAAWFDPDLPDPPPLPPPVGLPAIDDGLARLARQAELVREPVTSETIA
Sequences:
>Translated_688_residues MTPADAPSRLTDRAGLPLTGGSLALNFRAVSLLEGIRAAIAVAGTLAAGALLDQPQLALAALGALLACFTDPGGALPARL PPMLIFGVAGAICLGGFGLLDGASPLLAIPVAGLAIFCCSLARIYGQGGLLTGNLLAVTIVLALDMPTGSPVAALHAAFG FWAGAAEAAILTLALWRIRPFGPARAALADAALALAELARDLAEREADAGGETGFDLHARGHRRAVREAIERARAVTQAT LRRRGVASQRANALVLRLATFDQLFGALIALGEEMAARGADDPAARRALAGIGDLLGAMAPELEAGRTLDTAPLRAGLEA LRGTVSSAKGDPALRRPLAAALDRLSVLITVSNAPGVTAADEIVPPDLMATILGPLRSNLSLASVPLRHALRSMLVAIPA LAFVAWLGNPFGHWLAITVILVLQPHFSATWIRAIERVGGTAAGGLVAAAIGLLVHTRLELAVAMVPLTLFAFAVRGVNY SAWVVLLTPMIVLLIEQIDPGANQWVVAASRVGFTLAGGILAVAANLVLWPSFEGNRLGAARRDAIAAHRTYLVATFAHL TADAPPPEAARRQAGLASNNLEASIARVMMEPHRDDDPLLRAAIVTDAALRRTAGRLAALALEPRPEAAARVGCRAWAEA LAAWFDPDLPDPPPLPPPVGLPAIDDGLARLARQAELVREPVTSETIA >Mature_687_residues TPADAPSRLTDRAGLPLTGGSLALNFRAVSLLEGIRAAIAVAGTLAAGALLDQPQLALAALGALLACFTDPGGALPARLP PMLIFGVAGAICLGGFGLLDGASPLLAIPVAGLAIFCCSLARIYGQGGLLTGNLLAVTIVLALDMPTGSPVAALHAAFGF WAGAAEAAILTLALWRIRPFGPARAALADAALALAELARDLAEREADAGGETGFDLHARGHRRAVREAIERARAVTQATL RRRGVASQRANALVLRLATFDQLFGALIALGEEMAARGADDPAARRALAGIGDLLGAMAPELEAGRTLDTAPLRAGLEAL RGTVSSAKGDPALRRPLAAALDRLSVLITVSNAPGVTAADEIVPPDLMATILGPLRSNLSLASVPLRHALRSMLVAIPAL AFVAWLGNPFGHWLAITVILVLQPHFSATWIRAIERVGGTAAGGLVAAAIGLLVHTRLELAVAMVPLTLFAFAVRGVNYS AWVVLLTPMIVLLIEQIDPGANQWVVAASRVGFTLAGGILAVAANLVLWPSFEGNRLGAARRDAIAAHRTYLVATFAHLT ADAPPPEAARRQAGLASNNLEASIARVMMEPHRDDDPLLRAAIVTDAALRRTAGRLAALALEPRPEAAARVGCRAWAEAL AAWFDPDLPDPPPLPPPVGLPAIDDGLARLARQAELVREPVTSETIA
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yccS/yhfK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010019 - InterPro: IPR010020 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71101; Mature: 70970
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPADAPSRLTDRAGLPLTGGSLALNFRAVSLLEGIRAAIAVAGTLAAGALLDQPQLALA CCCCCCCHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ALGALLACFTDPGGALPARLPPMLIFGVAGAICLGGFGLLDGASPLLAIPVAGLAIFCCS HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHH LARIYGQGGLLTGNLLAVTIVLALDMPTGSPVAALHAAFGFWAGAAEAAILTLALWRIRP HHHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FGPARAALADAALALAELARDLAEREADAGGETGFDLHARGHRRAVREAIERARAVTQAT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LRRRGVASQRANALVLRLATFDQLFGALIALGEEMAARGADDPAARRALAGIGDLLGAMA HHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC PELEAGRTLDTAPLRAGLEALRGTVSSAKGDPALRRPLAAALDRLSVLITVSNAPGVTAA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCC DEIVPPDLMATILGPLRSNLSLASVPLRHALRSMLVAIPALAFVAWLGNPFGHWLAITVI HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LVLQPHFSATWIRAIERVGGTAAGGLVAAAIGLLVHTRLELAVAMVPLTLFAFAVRGVNY HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SAWVVLLTPMIVLLIEQIDPGANQWVVAASRVGFTLAGGILAVAANLVLWPSFEGNRLGA HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCC ARRDAIAAHRTYLVATFAHLTADAPPPEAARRQAGLASNNLEASIARVMMEPHRDDDPLL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHH RAAIVTDAALRRTAGRLAALALEPRPEAAARVGCRAWAEALAAWFDPDLPDPPPLPPPVG HHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC LPAIDDGLARLARQAELVREPVTSETIA CCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TPADAPSRLTDRAGLPLTGGSLALNFRAVSLLEGIRAAIAVAGTLAAGALLDQPQLALA CCCCCCHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ALGALLACFTDPGGALPARLPPMLIFGVAGAICLGGFGLLDGASPLLAIPVAGLAIFCCS HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHH LARIYGQGGLLTGNLLAVTIVLALDMPTGSPVAALHAAFGFWAGAAEAAILTLALWRIRP HHHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FGPARAALADAALALAELARDLAEREADAGGETGFDLHARGHRRAVREAIERARAVTQAT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LRRRGVASQRANALVLRLATFDQLFGALIALGEEMAARGADDPAARRALAGIGDLLGAMA HHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC PELEAGRTLDTAPLRAGLEALRGTVSSAKGDPALRRPLAAALDRLSVLITVSNAPGVTAA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCC DEIVPPDLMATILGPLRSNLSLASVPLRHALRSMLVAIPALAFVAWLGNPFGHWLAITVI HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LVLQPHFSATWIRAIERVGGTAAGGLVAAAIGLLVHTRLELAVAMVPLTLFAFAVRGVNY HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SAWVVLLTPMIVLLIEQIDPGANQWVVAASRVGFTLAGGILAVAANLVLWPSFEGNRLGA HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCC ARRDAIAAHRTYLVATFAHLTADAPPPEAARRQAGLASNNLEASIARVMMEPHRDDDPLL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHH RAAIVTDAALRRTAGRLAALALEPRPEAAARVGCRAWAEALAAWFDPDLPDPPPLPPPVG HHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC LPAIDDGLARLARQAELVREPVTSETIA CCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]