Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is yhfK [C]

Identifier: 148260211

GI number: 148260211

Start: 1342448

End: 1344514

Strand: Reverse

Name: yhfK [C]

Synonym: Acry_1207

Alternate gene names: 148260211

Gene position: 1344514-1342448 (Counterclockwise)

Preceding gene: 148260212

Following gene: 148260210

Centisome position: 39.67

GC content: 72.81

Gene sequence:

>2067_bases
ATGACGCCGGCTGATGCGCCCTCCCGGCTGACCGATCGTGCAGGGTTGCCGCTGACGGGCGGCAGCCTCGCGCTGAACTT
CCGCGCCGTCTCCCTGCTCGAGGGAATTCGTGCCGCGATTGCGGTCGCCGGCACGCTCGCGGCGGGCGCCCTGCTGGACC
AGCCGCAACTCGCCCTCGCGGCGCTCGGCGCGCTGCTCGCCTGCTTTACCGATCCAGGCGGCGCGCTGCCGGCCCGCCTG
CCGCCGATGCTGATCTTCGGCGTGGCCGGCGCGATCTGCCTCGGAGGTTTCGGGCTGCTGGACGGCGCCAGCCCGTTGCT
TGCCATTCCCGTCGCGGGGCTTGCCATCTTCTGCTGCAGCCTTGCCCGCATCTACGGGCAGGGCGGATTGCTGACCGGCA
ACCTGCTTGCCGTCACGATCGTGCTGGCGCTCGACATGCCGACCGGCTCGCCGGTCGCCGCATTGCATGCGGCCTTCGGC
TTCTGGGCCGGCGCCGCGGAAGCCGCGATCCTGACCCTTGCGCTCTGGCGCATCCGTCCGTTCGGCCCGGCGCGCGCGGC
CTTGGCGGATGCGGCGCTCGCGCTGGCCGAGCTCGCCCGCGATCTTGCCGAACGCGAGGCCGATGCCGGCGGCGAGACCG
GGTTCGATTTGCACGCCCGCGGCCATCGCCGGGCCGTGCGCGAAGCGATCGAGCGCGCCCGCGCCGTCACCCAGGCCACC
CTGCGCCGGCGCGGCGTGGCAAGCCAGCGGGCGAACGCGCTCGTTCTTCGCCTGGCCACTTTTGACCAGCTGTTCGGCGC
GCTGATCGCGCTGGGTGAGGAAATGGCCGCGCGCGGCGCCGACGATCCCGCCGCTCGCCGCGCCCTCGCCGGCATCGGCG
ACCTGCTGGGAGCGATGGCGCCCGAACTCGAAGCCGGCCGCACGCTGGATACGGCGCCGCTCCGTGCCGGGCTGGAGGCT
CTGCGCGGCACGGTCTCCTCGGCGAAGGGCGATCCCGCGCTGCGCCGTCCGCTGGCCGCCGCGCTCGACCGCCTTTCGGT
GCTCATCACCGTCTCGAATGCGCCGGGCGTCACGGCCGCCGACGAGATCGTGCCGCCCGACCTGATGGCCACGATCCTTG
GCCCGTTGCGGTCCAATCTCAGCCTGGCCTCGGTGCCGCTGCGCCACGCCCTGCGCTCCATGCTGGTCGCAATCCCGGCG
CTCGCCTTCGTCGCCTGGCTCGGCAACCCGTTCGGCCATTGGCTCGCCATCACCGTGATCCTTGTGCTGCAGCCGCATTT
CTCGGCCACATGGATCCGCGCGATCGAACGCGTCGGCGGTACCGCGGCGGGCGGGCTGGTTGCCGCCGCCATCGGCCTGC
TGGTTCACACCAGGCTGGAACTCGCGGTGGCGATGGTGCCGCTCACGCTGTTCGCCTTCGCCGTGCGCGGGGTGAACTAC
AGCGCCTGGGTCGTTCTGCTCACGCCGATGATCGTGCTGCTGATCGAGCAGATCGATCCGGGGGCGAATCAGTGGGTCGT
CGCCGCCTCGCGCGTCGGTTTCACGCTGGCCGGCGGCATCCTCGCGGTTGCCGCCAATCTCGTGCTCTGGCCGAGTTTCG
AGGGTAACCGGCTTGGCGCGGCGCGGCGCGACGCCATTGCCGCGCACCGCACCTATCTCGTCGCGACCTTCGCGCATCTG
ACCGCCGACGCGCCGCCGCCTGAGGCCGCGCGCCGGCAGGCGGGGCTGGCCAGCAACAATCTCGAAGCCTCGATTGCGCG
GGTGATGATGGAGCCGCATCGCGACGACGACCCGCTGCTGCGCGCCGCGATCGTCACCGATGCCGCCTTGCGCCGCACGG
CCGGCAGGCTGGCGGCACTCGCCCTCGAGCCCCGCCCGGAGGCAGCGGCCCGGGTCGGCTGCCGGGCCTGGGCCGAGGCG
CTCGCCGCCTGGTTCGATCCCGACCTGCCGGACCCGCCGCCCTTGCCGCCGCCGGTGGGCCTGCCCGCGATCGATGACGG
GCTTGCGCGGCTGGCCCGGCAGGCGGAACTTGTCCGTGAACCCGTGACTTCGGAGACCATCGCATGA

Upstream 100 bases:

>100_bases
ACGGAAACGCGGCTCGCCGAATGGCTCGGCGCGCGCGGCCAGGCCGGAAGGCTGCCGCCGACGGGCTTCCCGCGGTCGGG
CACGTTCGGCCCGCCGGACG

Downstream 100 bases:

>100_bases
GCGATCAAGGCCCAACCCGCCGCAATGGTGGCGTGGTGCGCATTATCGAGGCGCTGCTGTTTGGCGGGCGCTGGCTGCTG
GCGCCGCTCTATCTCGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 688; Mature: 687

Protein sequence:

>688_residues
MTPADAPSRLTDRAGLPLTGGSLALNFRAVSLLEGIRAAIAVAGTLAAGALLDQPQLALAALGALLACFTDPGGALPARL
PPMLIFGVAGAICLGGFGLLDGASPLLAIPVAGLAIFCCSLARIYGQGGLLTGNLLAVTIVLALDMPTGSPVAALHAAFG
FWAGAAEAAILTLALWRIRPFGPARAALADAALALAELARDLAEREADAGGETGFDLHARGHRRAVREAIERARAVTQAT
LRRRGVASQRANALVLRLATFDQLFGALIALGEEMAARGADDPAARRALAGIGDLLGAMAPELEAGRTLDTAPLRAGLEA
LRGTVSSAKGDPALRRPLAAALDRLSVLITVSNAPGVTAADEIVPPDLMATILGPLRSNLSLASVPLRHALRSMLVAIPA
LAFVAWLGNPFGHWLAITVILVLQPHFSATWIRAIERVGGTAAGGLVAAAIGLLVHTRLELAVAMVPLTLFAFAVRGVNY
SAWVVLLTPMIVLLIEQIDPGANQWVVAASRVGFTLAGGILAVAANLVLWPSFEGNRLGAARRDAIAAHRTYLVATFAHL
TADAPPPEAARRQAGLASNNLEASIARVMMEPHRDDDPLLRAAIVTDAALRRTAGRLAALALEPRPEAAARVGCRAWAEA
LAAWFDPDLPDPPPLPPPVGLPAIDDGLARLARQAELVREPVTSETIA

Sequences:

>Translated_688_residues
MTPADAPSRLTDRAGLPLTGGSLALNFRAVSLLEGIRAAIAVAGTLAAGALLDQPQLALAALGALLACFTDPGGALPARL
PPMLIFGVAGAICLGGFGLLDGASPLLAIPVAGLAIFCCSLARIYGQGGLLTGNLLAVTIVLALDMPTGSPVAALHAAFG
FWAGAAEAAILTLALWRIRPFGPARAALADAALALAELARDLAEREADAGGETGFDLHARGHRRAVREAIERARAVTQAT
LRRRGVASQRANALVLRLATFDQLFGALIALGEEMAARGADDPAARRALAGIGDLLGAMAPELEAGRTLDTAPLRAGLEA
LRGTVSSAKGDPALRRPLAAALDRLSVLITVSNAPGVTAADEIVPPDLMATILGPLRSNLSLASVPLRHALRSMLVAIPA
LAFVAWLGNPFGHWLAITVILVLQPHFSATWIRAIERVGGTAAGGLVAAAIGLLVHTRLELAVAMVPLTLFAFAVRGVNY
SAWVVLLTPMIVLLIEQIDPGANQWVVAASRVGFTLAGGILAVAANLVLWPSFEGNRLGAARRDAIAAHRTYLVATFAHL
TADAPPPEAARRQAGLASNNLEASIARVMMEPHRDDDPLLRAAIVTDAALRRTAGRLAALALEPRPEAAARVGCRAWAEA
LAAWFDPDLPDPPPLPPPVGLPAIDDGLARLARQAELVREPVTSETIA
>Mature_687_residues
TPADAPSRLTDRAGLPLTGGSLALNFRAVSLLEGIRAAIAVAGTLAAGALLDQPQLALAALGALLACFTDPGGALPARLP
PMLIFGVAGAICLGGFGLLDGASPLLAIPVAGLAIFCCSLARIYGQGGLLTGNLLAVTIVLALDMPTGSPVAALHAAFGF
WAGAAEAAILTLALWRIRPFGPARAALADAALALAELARDLAEREADAGGETGFDLHARGHRRAVREAIERARAVTQATL
RRRGVASQRANALVLRLATFDQLFGALIALGEEMAARGADDPAARRALAGIGDLLGAMAPELEAGRTLDTAPLRAGLEAL
RGTVSSAKGDPALRRPLAAALDRLSVLITVSNAPGVTAADEIVPPDLMATILGPLRSNLSLASVPLRHALRSMLVAIPAL
AFVAWLGNPFGHWLAITVILVLQPHFSATWIRAIERVGGTAAGGLVAAAIGLLVHTRLELAVAMVPLTLFAFAVRGVNYS
AWVVLLTPMIVLLIEQIDPGANQWVVAASRVGFTLAGGILAVAANLVLWPSFEGNRLGAARRDAIAAHRTYLVATFAHLT
ADAPPPEAARRQAGLASNNLEASIARVMMEPHRDDDPLLRAAIVTDAALRRTAGRLAALALEPRPEAAARVGCRAWAEAL
AAWFDPDLPDPPPLPPPVGLPAIDDGLARLARQAELVREPVTSETIA

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71101; Mature: 70970

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPADAPSRLTDRAGLPLTGGSLALNFRAVSLLEGIRAAIAVAGTLAAGALLDQPQLALA
CCCCCCCHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ALGALLACFTDPGGALPARLPPMLIFGVAGAICLGGFGLLDGASPLLAIPVAGLAIFCCS
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHH
LARIYGQGGLLTGNLLAVTIVLALDMPTGSPVAALHAAFGFWAGAAEAAILTLALWRIRP
HHHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FGPARAALADAALALAELARDLAEREADAGGETGFDLHARGHRRAVREAIERARAVTQAT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LRRRGVASQRANALVLRLATFDQLFGALIALGEEMAARGADDPAARRALAGIGDLLGAMA
HHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
PELEAGRTLDTAPLRAGLEALRGTVSSAKGDPALRRPLAAALDRLSVLITVSNAPGVTAA
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCC
DEIVPPDLMATILGPLRSNLSLASVPLRHALRSMLVAIPALAFVAWLGNPFGHWLAITVI
HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LVLQPHFSATWIRAIERVGGTAAGGLVAAAIGLLVHTRLELAVAMVPLTLFAFAVRGVNY
HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SAWVVLLTPMIVLLIEQIDPGANQWVVAASRVGFTLAGGILAVAANLVLWPSFEGNRLGA
HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCC
ARRDAIAAHRTYLVATFAHLTADAPPPEAARRQAGLASNNLEASIARVMMEPHRDDDPLL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHH
RAAIVTDAALRRTAGRLAALALEPRPEAAARVGCRAWAEALAAWFDPDLPDPPPLPPPVG
HHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LPAIDDGLARLARQAELVREPVTSETIA
CCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TPADAPSRLTDRAGLPLTGGSLALNFRAVSLLEGIRAAIAVAGTLAAGALLDQPQLALA
CCCCCCHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ALGALLACFTDPGGALPARLPPMLIFGVAGAICLGGFGLLDGASPLLAIPVAGLAIFCCS
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHH
LARIYGQGGLLTGNLLAVTIVLALDMPTGSPVAALHAAFGFWAGAAEAAILTLALWRIRP
HHHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FGPARAALADAALALAELARDLAEREADAGGETGFDLHARGHRRAVREAIERARAVTQAT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LRRRGVASQRANALVLRLATFDQLFGALIALGEEMAARGADDPAARRALAGIGDLLGAMA
HHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
PELEAGRTLDTAPLRAGLEALRGTVSSAKGDPALRRPLAAALDRLSVLITVSNAPGVTAA
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCC
DEIVPPDLMATILGPLRSNLSLASVPLRHALRSMLVAIPALAFVAWLGNPFGHWLAITVI
HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LVLQPHFSATWIRAIERVGGTAAGGLVAAAIGLLVHTRLELAVAMVPLTLFAFAVRGVNY
HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SAWVVLLTPMIVLLIEQIDPGANQWVVAASRVGFTLAGGILAVAANLVLWPSFEGNRLGA
HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCC
ARRDAIAAHRTYLVATFAHLTADAPPPEAARRQAGLASNNLEASIARVMMEPHRDDDPLL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHH
RAAIVTDAALRRTAGRLAALALEPRPEAAARVGCRAWAEALAAWFDPDLPDPPPLPPPVG
HHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LPAIDDGLARLARQAELVREPVTSETIA
CCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]