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The map label for this gene is 148260184

Identifier: 148260184

GI number: 148260184

Start: 1316583

End: 1317293

Strand: Reverse

Name: 148260184

Synonym: Acry_1180

Alternate gene names: NA

Gene position: 1317293-1316583 (Counterclockwise)

Preceding gene: 148260186

Following gene: 148260183

Centisome position: 38.87

GC content: 74.12

Gene sequence:

>711_bases
ATGAACGAACCCGATCTCGCGGCCCAGGTCCGCCGCGCCGATCCCGACCGCTTCCTCGGCGCGATCTTCGCCCCGCCGCA
ATCGCGACGCTGGCTGTTCGTGCTCTACGCCTTCAATCATGAACTGGCCCGGGCGCGCGAAGTCGCGAGCCAGCCGCCGC
TCGCGCTGATTCGCCTGCAATGGTGGCGCGAGGTCGTTGAAGGCGCCGATCGCGCCCATCCGCTCGCCGTGGAACTCCGT
GCCGGGCTGGCCCAAGGCATCTTTTCCGATGCCGCCCTCACGGCGCTGATCGACGCGCGCGAGGCCGAAGCCGAACCGAT
TCCCGACCGCGCCGCCTTTCTCGACTACGCGCGCGGCACGGCGGGGGGGCTGGCGCGGATTGCCGGCACGGTGCTCGGCG
TGACCGAGTCCGCCGAACTCGCGGCGCTGGAGGATCTCGGCACCGGCTATGGCATTGCCGGCATTCTCCGCGCCGCCCCC
GCGCTTGAAGCCGCCGGCCGCGACCTGCTGCCGCAGGATGGCACCGACCCTGCGGCCTTGCGCGACGAGGCGGCCCGCCT
GCTGCGCCGCCGCGCGCCGCGTGCCGGTTTGGCCGCCGCCCTGCCGGCGGTGCTCGCCCGGCGCGACCTGCGCCGCCCGA
CCGGTCCGGCGCCGCGCGGCCTCGCGGACCGGATTGCCGTTGTCATCGCCGGGCTGACCGGCCGCTGTTGA

Upstream 100 bases:

>100_bases
GTTTGGGCTTCTGTTTCGGCGCCGGCACGGTGCGTGCCGACCGCTCGTCCGGTAGCTATGGTCCGGCCCTGCCAGCGTCA
AGCATCGAAAGAGTTCCGCA

Downstream 100 bases:

>100_bases
GCCGCACCCCTCGCCCCCGCGCGGCGCAGGTGATATGACGCCGCCATGACTGACACGACCGACCAGACCGAAGGGCCAAG
CGGCCAGGTGCCCGTGACGA

Product: phytoene/squalene synthetase-like protein

Products: diphosphate; prephytoene diphosphate

Alternate protein names: Phytoene Synthase; Phytoene Synthase Protein; Phytoene/Squalene Synthetase-Like Protein; Phytoene Synthase Family Protein; Squalene And Phytoene Synthases Superfamily; Squalene; Phytoene/Squalene Synthetase; Phytoene/Squalene Synthase

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNEPDLAAQVRRADPDRFLGAIFAPPQSRRWLFVLYAFNHELARAREVASQPPLALIRLQWWREVVEGADRAHPLAVELR
AGLAQGIFSDAALTALIDAREAEAEPIPDRAAFLDYARGTAGGLARIAGTVLGVTESAELAALEDLGTGYGIAGILRAAP
ALEAAGRDLLPQDGTDPAALRDEAARLLRRRAPRAGLAAALPAVLARRDLRRPTGPAPRGLADRIAVVIAGLTGRC

Sequences:

>Translated_236_residues
MNEPDLAAQVRRADPDRFLGAIFAPPQSRRWLFVLYAFNHELARAREVASQPPLALIRLQWWREVVEGADRAHPLAVELR
AGLAQGIFSDAALTALIDAREAEAEPIPDRAAFLDYARGTAGGLARIAGTVLGVTESAELAALEDLGTGYGIAGILRAAP
ALEAAGRDLLPQDGTDPAALRDEAARLLRRRAPRAGLAAALPAVLARRDLRRPTGPAPRGLADRIAVVIAGLTGRC
>Mature_236_residues
MNEPDLAAQVRRADPDRFLGAIFAPPQSRRWLFVLYAFNHELARAREVASQPPLALIRLQWWREVVEGADRAHPLAVELR
AGLAQGIFSDAALTALIDAREAEAEPIPDRAAFLDYARGTAGGLARIAGTVLGVTESAELAALEDLGTGYGIAGILRAAP
ALEAAGRDLLPQDGTDPAALRDEAARLLRRRAPRAGLAAALPAVLARRDLRRPTGPAPRGLADRIAVVIAGLTGRC

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI124517691, Length=170, Percent_Identity=28.2352941176471, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.32

Molecular weight: Translated: 25092; Mature: 25092

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEPDLAAQVRRADPDRFLGAIFAPPQSRRWLFVLYAFNHELARAREVASQPPLALIRLQ
CCCCHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHH
WWREVVEGADRAHPLAVELRAGLAQGIFSDAALTALIDAREAEAEPIPDRAAFLDYARGT
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
AGGLARIAGTVLGVTESAELAALEDLGTGYGIAGILRAAPALEAAGRDLLPQDGTDPAAL
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
RDEAARLLRRRAPRAGLAAALPAVLARRDLRRPTGPAPRGLADRIAVVIAGLTGRC
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNEPDLAAQVRRADPDRFLGAIFAPPQSRRWLFVLYAFNHELARAREVASQPPLALIRLQ
CCCCHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHH
WWREVVEGADRAHPLAVELRAGLAQGIFSDAALTALIDAREAEAEPIPDRAAFLDYARGT
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
AGGLARIAGTVLGVTESAELAALEDLGTGYGIAGILRAAPALEAAGRDLLPQDGTDPAAL
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
RDEAARLLRRRAPRAGLAAALPAVLARRDLRRPTGPAPRGLADRIAVVIAGLTGRC
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: geranylgeranyl diphosphate

Specific reaction: 2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA