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The map label for this gene is rbsC [H]

Identifier: 148260143

GI number: 148260143

Start: 1268517

End: 1269521

Strand: Reverse

Name: rbsC [H]

Synonym: Acry_1139

Alternate gene names: 148260143

Gene position: 1269521-1268517 (Counterclockwise)

Preceding gene: 148260144

Following gene: 148260142

Centisome position: 37.46

GC content: 69.75

Gene sequence:

>1005_bases
ATGAAGCCGCCTGAAACCGCGCGCCCCGCCGCCCCCCGCCGGCGCGGACGGATCGAGAAGCATCTGGGGCCGGTGTCCTG
CGCCATCGGCCTTGCCGTGGTGATCGGCCTCTATGCGCTCCGCCAGCCGCTGATCCTCTCGCCCTTTGGCCTCGCCAGCC
TCGCCAACGTCTCGGTGCCGCTTGCCCTTGCCGCGATCGGCCAGACCATCGTGCTGCTCGGCGCGGGCCTCGATCTGTCG
ATCGGCGCCGAGATCACCCTGGTCAACTGCTTCGCGGCGACGACGATGCAGGGCAGCCCGCTCGGCATCGGCGGCATCGT
CGTGCTGTCGCTGCTGATCGGCCTCGGGCTCGGCGCGGTGAACGGCCTGATCATCGCCTACGGGCGCGTGGAACCGCTGA
TCGCCACCTTCTGCACCTCGTTCATCTATGGCGGCGCGGCGCTGATCATCCTGCCGCGCCCCGGCGGCACCATCCCCGCC
GGCTTCGCCAACGCGCTGACCGGAAACTGGGGCATTTTGCCGTTCTCGCTGGTGTTGCTGGCCGCCGCCGTGCTGCTGGC
CTGGATTCCCGTCTTCCGCTCCCGCCTCGGCCGGTTCATCGTCGCGGTCGGCGATGACGCCGAAAGCGCGCGCGTCTCCG
GCCTGCCGGTGCGCCGCGTCGAAATGACCAGCTACGTGCTGGCCGGACTGTTCGCCGCGATCGCCGCCCTGTTCCTCGCC
GCCGAGACCACATCCGGCGATCCCACGATCGGCAGCATCTACACGCTCAACTCGCTCGCCGCCGCGGTGCTCGGCGGCGT
CGCGCTGACCGGCGGGCGCGGCACGGCCATCGGGCCGATCCTCGGCAGTTTCCTGCTCTCTATCATCCTCAACGCCCTCG
GCGTCTTCAACGTCTCCGCCTTCTGGCAGGATTGCATCGAAGGATTGATCCTCATGGTGGTTCTCGGCCTCGGCGGGCTG
CGCCTGCTGCGCGGCGGCAACTGGCTCACGGTGCTGCGCCAGTGA

Upstream 100 bases:

>100_bases
CGCGTTCTGGTCTTCCGCGAGGGCCGCGTCGCCGGGTCGCTCGAAGGAGCCTCCATCACGGAACAGAACATCCTCGACCT
GTCCTTCCACGAGGCCGCGC

Downstream 100 bases:

>100_bases
CGGCGCCCGGCAAGACGGCGCGCATCGGGACAGGCCCGGCGCCGTTCGCCGCCCGCCTCGGGCCGGCGGCGCGGCGCATG
CTGCTGTCCTACCTGATCCT

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKPPETARPAAPRRRGRIEKHLGPVSCAIGLAVVIGLYALRQPLILSPFGLASLANVSVPLALAAIGQTIVLLGAGLDLS
IGAEITLVNCFAATTMQGSPLGIGGIVVLSLLIGLGLGAVNGLIIAYGRVEPLIATFCTSFIYGGAALIILPRPGGTIPA
GFANALTGNWGILPFSLVLLAAAVLLAWIPVFRSRLGRFIVAVGDDAESARVSGLPVRRVEMTSYVLAGLFAAIAALFLA
AETTSGDPTIGSIYTLNSLAAAVLGGVALTGGRGTAIGPILGSFLLSIILNALGVFNVSAFWQDCIEGLILMVVLGLGGL
RLLRGGNWLTVLRQ

Sequences:

>Translated_334_residues
MKPPETARPAAPRRRGRIEKHLGPVSCAIGLAVVIGLYALRQPLILSPFGLASLANVSVPLALAAIGQTIVLLGAGLDLS
IGAEITLVNCFAATTMQGSPLGIGGIVVLSLLIGLGLGAVNGLIIAYGRVEPLIATFCTSFIYGGAALIILPRPGGTIPA
GFANALTGNWGILPFSLVLLAAAVLLAWIPVFRSRLGRFIVAVGDDAESARVSGLPVRRVEMTSYVLAGLFAAIAALFLA
AETTSGDPTIGSIYTLNSLAAAVLGGVALTGGRGTAIGPILGSFLLSIILNALGVFNVSAFWQDCIEGLILMVVLGLGGL
RLLRGGNWLTVLRQ
>Mature_334_residues
MKPPETARPAAPRRRGRIEKHLGPVSCAIGLAVVIGLYALRQPLILSPFGLASLANVSVPLALAAIGQTIVLLGAGLDLS
IGAEITLVNCFAATTMQGSPLGIGGIVVLSLLIGLGLGAVNGLIIAYGRVEPLIATFCTSFIYGGAALIILPRPGGTIPA
GFANALTGNWGILPFSLVLLAAAVLLAWIPVFRSRLGRFIVAVGDDAESARVSGLPVRRVEMTSYVLAGLFAAIAALFLA
AETTSGDPTIGSIYTLNSLAAAVLGGVALTGGRGTAIGPILGSFLLSIILNALGVFNVSAFWQDCIEGLILMVVLGLGGL
RLLRGGNWLTVLRQ

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=306, Percent_Identity=31.0457516339869, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI145693152, Length=193, Percent_Identity=35.7512953367876, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI1789992, Length=121, Percent_Identity=37.1900826446281, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788896, Length=302, Percent_Identity=26.8211920529801, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI87082395, Length=312, Percent_Identity=26.6025641025641, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790524, Length=280, Percent_Identity=25.3571428571429, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1788471, Length=279, Percent_Identity=30.8243727598566, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787794, Length=255, Percent_Identity=27.4509803921569, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI145693214, Length=239, Percent_Identity=32.2175732217573, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787793, Length=268, Percent_Identity=29.4776119402985, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34135; Mature: 34135

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPPETARPAAPRRRGRIEKHLGPVSCAIGLAVVIGLYALRQPLILSPFGLASLANVSVP
CCCCCCCCCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHCHHH
LALAAIGQTIVLLGAGLDLSIGAEITLVNCFAATTMQGSPLGIGGIVVLSLLIGLGLGAV
HHHHHHHHHHEEEECCCCEECCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHCHHHH
NGLIIAYGRVEPLIATFCTSFIYGGAALIILPRPGGTIPAGFANALTGNWGILPFSLVLL
CCEEEEECCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHH
AAAVLLAWIPVFRSRLGRFIVAVGDDAESARVSGLPVRRVEMTSYVLAGLFAAIAALFLA
HHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AETTSGDPTIGSIYTLNSLAAAVLGGVALTGGRGTAIGPILGSFLLSIILNALGVFNVSA
HCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FWQDCIEGLILMVVLGLGGLRLLRGGNWLTVLRQ
HHHHHHHHHHHHHHHHCCCCEEHCCCCEEEEECC
>Mature Secondary Structure
MKPPETARPAAPRRRGRIEKHLGPVSCAIGLAVVIGLYALRQPLILSPFGLASLANVSVP
CCCCCCCCCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHCHHH
LALAAIGQTIVLLGAGLDLSIGAEITLVNCFAATTMQGSPLGIGGIVVLSLLIGLGLGAV
HHHHHHHHHHEEEECCCCEECCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHCHHHH
NGLIIAYGRVEPLIATFCTSFIYGGAALIILPRPGGTIPAGFANALTGNWGILPFSLVLL
CCEEEEECCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHH
AAAVLLAWIPVFRSRLGRFIVAVGDDAESARVSGLPVRRVEMTSYVLAGLFAAIAALFLA
HHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AETTSGDPTIGSIYTLNSLAAAVLGGVALTGGRGTAIGPILGSFLLSIILNALGVFNVSA
HCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FWQDCIEGLILMVVLGLGGLRLLRGGNWLTVLRQ
HHHHHHHHHHHHHHHHCCCCEEHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]