| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is pcoA [H]
Identifier: 148260136
GI number: 148260136
Start: 1261415
End: 1262929
Strand: Reverse
Name: pcoA [H]
Synonym: Acry_1132
Alternate gene names: 148260136
Gene position: 1262929-1261415 (Counterclockwise)
Preceding gene: 148260137
Following gene: 148260133
Centisome position: 37.26
GC content: 68.32
Gene sequence:
>1515_bases ATGTCCTCCCGCCTGACACGTCGCCTTCTTCTTGCCGCCGCCGGTTCCGCCGGTGCCGTTCCATGGGTTTCCGCGCAGGC CGGTCAGGCCCCTGCCGCGGCCGCGGGCGGGCATCGCCTGCTGGCTGGCACCCGCACCCTCGAGGTGAACGGCCGCGCGG CCCGGGTCTTCCGTCTCACCGCTGATAGCGGGCAAGCCGGGCTGTTCCTCGCACCGGGAGAGCGCTTCCGCGTCGATCTG ACCAACACGCTCGACGAGCACACGATCATCCACTGGCACGGCCAGCTGCCGCCCTGGACCCAGGATGGCTTCCCCTGGCC GCAGACGCCGCCGCTGGCGCCAGGCGCGACCCGAAGCTACGACTACGCGCCGATCCCCGGCACCTACTGGATGCATTCGC ATGACGGCCTGCAGGAGCAGAGCCTGATGACGGCGCCGCTGATCGTCCGCACCGCCGCCGAGATGCGCGAGGACCGGCAG GACATCGTGCTGATGCTGCACGATTTCAGCTTCAGGACGCCGGACGACCTTCTGGCCGGCCTGACGGGGGCGAAGCCTTC CGCCGTCCACGATATGGTCCGCCATGCCGAGAATGTCGCGGCGCCGGCCATGAACATGCATGGCATGGCCTCCGGCGGCA TGGCGTCGATGTCCTCGGGCGACATGGGGCAGGGGCACTCCATGGGCGGCATGACCATGGATGTGAACGATATCGACTAC GACGCCTTCCTCGCCAACGACCGCACGCTCGCCGATCCCGAGGTGGTGCGCGTCGGGCGCAGCGGGCGCGTGCACCTGCG CATCATCAACGGCTCGTCCTCCAGCCAGTTCTGGATCGATCTCGGGACCCTCAAAGGCAGGATCGTCGCCGTCGACGGTC ATCCGGTTCACCCGGTCGCCGGCGCCCGCTTTCCGCTCGCCATCGCCCAGCGGATGGACATCCTCGTCGACCTGCCGCCC TCCGGCGCCTTTCCCATCCTCGCGCGTCTCGAAGCCTCGCGTCGCCGCACGGGCATCGTCCTGGCAACGCCGGGTGCGCG CATCCCCACGATCGCCGAAACGGGGCACGACAGGACGCCGCCGCTCGACAATGCGCTGGAAATGCGTCTCGCCGCGGCCC AGCCGCTGAGGCCGCGCAAGCCCGACCTCGTGCACCGCATCGACCTGTCCGGATCGATGAAACCCTATCGCTGGGCGCTG AACGGCGACTACTGGCCGCATGTCACGCCGCTCATGCTCGAAGCCGGGCAGCGCGTGGAAATCGAGCTGGTCAATCGCTC TTCCATGGCGCATCCTATGCATCTTCACGGGCATGCCTTCCAGGTCATCGGCATCAACGGCAAGACGGTGAACGGCGCGG TCCGGGATACGGTTCTGGTCACCCCCCGGCACGGCCGCGTGCGGATCGCCTTCGATGCGGACAATCCCGGCCGCTGGGCC TTCCACTGCCATAACCTCTACCACATGGCGACCGGCATGATGACCGAGTTCCGCTATCGCGGGATCGCGGTCTGA
Upstream 100 bases:
>100_bases GCACCATCTGCCCGAGCAAATTTCGCGTTGACCTTCCCACGATGGAAGGCCCCATATCGCTCCCGCCACCGAACGCCGAT CCCAGCCAGGAATATCGCCA
Downstream 100 bases:
>100_bases CGCAGGGGCCAGGCCGGAACTTCAGGACCGCGCCGCGGGGAGATGATGCCGCGAACAGTCCGTCGCGCACAGCGCGGCAT CGGTCTCGATCTGCAGGGTG
Product: multicopper oxidase, type 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MSSRLTRRLLLAAAGSAGAVPWVSAQAGQAPAAAAGGHRLLAGTRTLEVNGRAARVFRLTADSGQAGLFLAPGERFRVDL TNTLDEHTIIHWHGQLPPWTQDGFPWPQTPPLAPGATRSYDYAPIPGTYWMHSHDGLQEQSLMTAPLIVRTAAEMREDRQ DIVLMLHDFSFRTPDDLLAGLTGAKPSAVHDMVRHAENVAAPAMNMHGMASGGMASMSSGDMGQGHSMGGMTMDVNDIDY DAFLANDRTLADPEVVRVGRSGRVHLRIINGSSSSQFWIDLGTLKGRIVAVDGHPVHPVAGARFPLAIAQRMDILVDLPP SGAFPILARLEASRRRTGIVLATPGARIPTIAETGHDRTPPLDNALEMRLAAAQPLRPRKPDLVHRIDLSGSMKPYRWAL NGDYWPHVTPLMLEAGQRVEIELVNRSSMAHPMHLHGHAFQVIGINGKTVNGAVRDTVLVTPRHGRVRIAFDADNPGRWA FHCHNLYHMATGMMTEFRYRGIAV
Sequences:
>Translated_504_residues MSSRLTRRLLLAAAGSAGAVPWVSAQAGQAPAAAAGGHRLLAGTRTLEVNGRAARVFRLTADSGQAGLFLAPGERFRVDL TNTLDEHTIIHWHGQLPPWTQDGFPWPQTPPLAPGATRSYDYAPIPGTYWMHSHDGLQEQSLMTAPLIVRTAAEMREDRQ DIVLMLHDFSFRTPDDLLAGLTGAKPSAVHDMVRHAENVAAPAMNMHGMASGGMASMSSGDMGQGHSMGGMTMDVNDIDY DAFLANDRTLADPEVVRVGRSGRVHLRIINGSSSSQFWIDLGTLKGRIVAVDGHPVHPVAGARFPLAIAQRMDILVDLPP SGAFPILARLEASRRRTGIVLATPGARIPTIAETGHDRTPPLDNALEMRLAAAQPLRPRKPDLVHRIDLSGSMKPYRWAL NGDYWPHVTPLMLEAGQRVEIELVNRSSMAHPMHLHGHAFQVIGINGKTVNGAVRDTVLVTPRHGRVRIAFDADNPGRWA FHCHNLYHMATGMMTEFRYRGIAV >Mature_503_residues SSRLTRRLLLAAAGSAGAVPWVSAQAGQAPAAAAGGHRLLAGTRTLEVNGRAARVFRLTADSGQAGLFLAPGERFRVDLT NTLDEHTIIHWHGQLPPWTQDGFPWPQTPPLAPGATRSYDYAPIPGTYWMHSHDGLQEQSLMTAPLIVRTAAEMREDRQD IVLMLHDFSFRTPDDLLAGLTGAKPSAVHDMVRHAENVAAPAMNMHGMASGGMASMSSGDMGQGHSMGGMTMDVNDIDYD AFLANDRTLADPEVVRVGRSGRVHLRIINGSSSSQFWIDLGTLKGRIVAVDGHPVHPVAGARFPLAIAQRMDILVDLPPS GAFPILARLEASRRRTGIVLATPGARIPTIAETGHDRTPPLDNALEMRLAAAQPLRPRKPDLVHRIDLSGSMKPYRWALN GDYWPHVTPLMLEAGQRVEIELVNRSSMAHPMHLHGHAFQVIGINGKTVNGAVRDTVLVTPRHGRVRIAFDADNPGRWAF HCHNLYHMATGMMTEFRYRGIAV
Specific function: Required for the copper-inducible expression of copper resistance. May have oxidase activity [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family. CopA subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323703, Length=490, Percent_Identity=24.0816326530612, Blast_Score=90, Evalue=1e-18,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR006376 - InterPro: IPR002355 - InterPro: IPR008972 - InterPro: IPR006311 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 54855; Mature: 54723
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS00079 MULTICOPPER_OXIDASE1 ; PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRLTRRLLLAAAGSAGAVPWVSAQAGQAPAAAAGGHRLLAGTRTLEVNGRAARVFRLT CCCHHHHHEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEE ADSGQAGLFLAPGERFRVDLTNTLDEHTIIHWHGQLPPWTQDGFPWPQTPPLAPGATRSY CCCCCCCEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC DYAPIPGTYWMHSHDGLQEQSLMTAPLIVRTAAEMREDRQDIVLMLHDFSFRTPDDLLAG CCCCCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHC LTGAKPSAVHDMVRHAENVAAPAMNMHGMASGGMASMSSGDMGQGHSMGGMTMDVNDIDY CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC DAFLANDRTLADPEVVRVGRSGRVHLRIINGSSSSQFWIDLGTLKGRIVAVDGHPVHPVA EEEEECCCCCCCCHHEEECCCCEEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCC GARFPLAIAQRMDILVDLPPSGAFPILARLEASRRRTGIVLATPGARIPTIAETGHDRTP CCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCC PLDNALEMRLAAAQPLRPRKPDLVHRIDLSGSMKPYRWALNGDYWPHVTPLMLEAGQRVE CCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCEEE IELVNRSSMAHPMHLHGHAFQVIGINGKTVNGAVRDTVLVTPRHGRVRIAFDADNPGRWA EEEECCCCCCCCEEECCCEEEEEECCCCEECCCEEEEEEEECCCCEEEEEEECCCCCCEE FHCHNLYHMATGMMTEFRYRGIAV EEECCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSRLTRRLLLAAAGSAGAVPWVSAQAGQAPAAAAGGHRLLAGTRTLEVNGRAARVFRLT CCHHHHHEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEE ADSGQAGLFLAPGERFRVDLTNTLDEHTIIHWHGQLPPWTQDGFPWPQTPPLAPGATRSY CCCCCCCEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC DYAPIPGTYWMHSHDGLQEQSLMTAPLIVRTAAEMREDRQDIVLMLHDFSFRTPDDLLAG CCCCCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHC LTGAKPSAVHDMVRHAENVAAPAMNMHGMASGGMASMSSGDMGQGHSMGGMTMDVNDIDY CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC DAFLANDRTLADPEVVRVGRSGRVHLRIINGSSSSQFWIDLGTLKGRIVAVDGHPVHPVA EEEEECCCCCCCCHHEEECCCCEEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCC GARFPLAIAQRMDILVDLPPSGAFPILARLEASRRRTGIVLATPGARIPTIAETGHDRTP CCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCC PLDNALEMRLAAAQPLRPRKPDLVHRIDLSGSMKPYRWALNGDYWPHVTPLMLEAGQRVE CCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCEEE IELVNRSSMAHPMHLHGHAFQVIGINGKTVNGAVRDTVLVTPRHGRVRIAFDADNPGRWA EEEECCCCCCCCEEECCCEEEEEECCCCEECCCEEEEEEEECCCCEEEEEEECCCCCCEE FHCHNLYHMATGMMTEFRYRGIAV EEECCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8594334 [H]