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The map label for this gene is cyoA [H]

Identifier: 148260103

GI number: 148260103

Start: 1220770

End: 1221774

Strand: Reverse

Name: cyoA [H]

Synonym: Acry_1096

Alternate gene names: 148260103

Gene position: 1221774-1220770 (Counterclockwise)

Preceding gene: 148260105

Following gene: 148260102

Centisome position: 36.05

GC content: 67.46

Gene sequence:

>1005_bases
TTGTCGTTGTGTGATGAGGCGCGTCTGAAGGAACGGCGGTTCCGCCCGTGGCGCCCTTTGGCGCCGCTAACGCCATTGCT
GCTCACCGGCTGTTCCGGCGGGCCGTTCCGCGTGTTCGACCCGAAGGGGCCGGTCGCCCGCGCGTCGCTGAATTTCACCA
TCATCGACGTTGTCGTGATGGCCTTCATCATCGTGCCGACGGCGTGCTTCATCCTCTGGTGCATCTGGCGCTACCGCCGC
TCCCGCGCCGCCGCCTACAGCCCCGGCTTCAGCCACTCCCTGAAACTCGAAGCCGTCATGTGGGGAATCCCGATCGTCGT
CGTCGCCGGCCTCGCCTATGCCTCCTACAACGGCACCTTCGCGGTCGATCCCTACGGCCCGCATGTCCTGCGCATGCCGG
CGAGGGCAGGGCGCTCGCACCCGCTGAAGATCGACGTCGTCGCAACCGACTGGCAGTGGCTCTTCATCTATCCGAAGCAG
CATGTCGCCAGCGTCGACCGGCTCGTCGTGCCCGCCGGCCGCAATGTCGAGTTCCGCCTGACCTCGACCAGCGTCGTCAA
CGACTTCTTCATCCCCCAGCTCACCGACATGATCGACGTGATGCCCGGCATGCGCACCAAGGATGCGATGCGCGCCAACG
GCCAGGGGCGCTACGAGGGCTTCGCCGCCAATTTCAGCGGCGCCGGCTTCTCCTGGATGCGCTTTGCCACCGATGTCGTC
GGCAAGCGGGGATTTGCGAAATTCGTGCGCCACGCGGCAGCCGCCCCGGCCGCGCTGACCTACGCCACCTTCGAGCGTTT
CGCGCGGCCGACGATCAATCTCGACCAGCGGCCGCGCTATTTCAGCGCCCCGGCGCCGCACCTGTTCCGCCGCATCGTCG
AGGCGTCGCGCAACGGCAAGACCTACCCGGTTCCGCCCCGCCTCACCGAAGCGATGGCGCGGGACCTGCGCGCCGGGGCC
AGCTATTTCTCTCATCCGGCCGCGTCGCGCGGAACATCCGGCTGA

Upstream 100 bases:

>100_bases
CACATAAACTTGCTCTGAACCCCTTGTGAGATTCCGGAAACAGGGTGGTCACTCCAGTCCGCTGCCCTTATTTCAACGGC
GATCATGACGGAGGATCGCA

Downstream 100 bases:

>100_bases
CGCCGGCAGCGGAAAGGAAGACTGCGTGCTCGTTCATCTTCAAGGTCCATGGTCGCCGCTGCTCGGGCGCCTGACTCTGA
GTGCCATCCCCTACACGAGC

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MSLCDEARLKERRFRPWRPLAPLTPLLLTGCSGGPFRVFDPKGPVARASLNFTIIDVVVMAFIIVPTACFILWCIWRYRR
SRAAAYSPGFSHSLKLEAVMWGIPIVVVAGLAYASYNGTFAVDPYGPHVLRMPARAGRSHPLKIDVVATDWQWLFIYPKQ
HVASVDRLVVPAGRNVEFRLTSTSVVNDFFIPQLTDMIDVMPGMRTKDAMRANGQGRYEGFAANFSGAGFSWMRFATDVV
GKRGFAKFVRHAAAAPAALTYATFERFARPTINLDQRPRYFSAPAPHLFRRIVEASRNGKTYPVPPRLTEAMARDLRAGA
SYFSHPAASRGTSG

Sequences:

>Translated_334_residues
MSLCDEARLKERRFRPWRPLAPLTPLLLTGCSGGPFRVFDPKGPVARASLNFTIIDVVVMAFIIVPTACFILWCIWRYRR
SRAAAYSPGFSHSLKLEAVMWGIPIVVVAGLAYASYNGTFAVDPYGPHVLRMPARAGRSHPLKIDVVATDWQWLFIYPKQ
HVASVDRLVVPAGRNVEFRLTSTSVVNDFFIPQLTDMIDVMPGMRTKDAMRANGQGRYEGFAANFSGAGFSWMRFATDVV
GKRGFAKFVRHAAAAPAALTYATFERFARPTINLDQRPRYFSAPAPHLFRRIVEASRNGKTYPVPPRLTEAMARDLRAGA
SYFSHPAASRGTSG
>Mature_333_residues
SLCDEARLKERRFRPWRPLAPLTPLLLTGCSGGPFRVFDPKGPVARASLNFTIIDVVVMAFIIVPTACFILWCIWRYRRS
RAAAYSPGFSHSLKLEAVMWGIPIVVVAGLAYASYNGTFAVDPYGPHVLRMPARAGRSHPLKIDVVATDWQWLFIYPKQH
VASVDRLVVPAGRNVEFRLTSTSVVNDFFIPQLTDMIDVMPGMRTKDAMRANGQGRYEGFAANFSGAGFSWMRFATDVVG
KRGFAKFVRHAAAAPAALTYATFERFARPTINLDQRPRYFSAPAPHLFRRIVEASRNGKTYPVPPRLTEAMARDLRAGAS
YFSHPAASRGTSG

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=272, Percent_Identity=35.6617647058824, Blast_Score=174, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 37162; Mature: 37031

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLCDEARLKERRFRPWRPLAPLTPLLLTGCSGGPFRVFDPKGPVARASLNFTIIDVVVM
CCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCEEEEECCHHHHHHHHH
AFIIVPTACFILWCIWRYRRSRAAAYSPGFSHSLKLEAVMWGIPIVVVAGLAYASYNGTF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHEECCCCE
AVDPYGPHVLRMPARAGRSHPLKIDVVATDWQWLFIYPKQHVASVDRLVVPAGRNVEFRL
EECCCCCCEEECCHHCCCCCCEEEEEEEECCEEEEEECHHHHHHHHHEEECCCCCEEEEE
TSTSVVNDFFIPQLTDMIDVMPGMRTKDAMRANGQGRYEGFAANFSGAGFSWMRFATDVV
ECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHH
GKRGFAKFVRHAAAAPAALTYATFERFARPTINLDQRPRYFSAPAPHLFRRIVEASRNGK
CCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
TYPVPPRLTEAMARDLRAGASYFSHPAASRGTSG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLCDEARLKERRFRPWRPLAPLTPLLLTGCSGGPFRVFDPKGPVARASLNFTIIDVVVM
CCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCEEEEECCHHHHHHHHH
AFIIVPTACFILWCIWRYRRSRAAAYSPGFSHSLKLEAVMWGIPIVVVAGLAYASYNGTF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHEECCCCE
AVDPYGPHVLRMPARAGRSHPLKIDVVATDWQWLFIYPKQHVASVDRLVVPAGRNVEFRL
EECCCCCCEEECCHHCCCCCCEEEEEEEECCEEEEEECHHHHHHHHHEEECCCCCEEEEE
TSTSVVNDFFIPQLTDMIDVMPGMRTKDAMRANGQGRYEGFAANFSGAGFSWMRFATDVV
ECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHH
GKRGFAKFVRHAAAAPAALTYATFERFARPTINLDQRPRYFSAPAPHLFRRIVEASRNGK
CCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
TYPVPPRLTEAMARDLRAGASYFSHPAASRGTSG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]