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The map label for this gene is rbsC [H]

Identifier: 148260071

GI number: 148260071

Start: 1186018

End: 1187115

Strand: Reverse

Name: rbsC [H]

Synonym: Acry_1063

Alternate gene names: 148260071

Gene position: 1187115-1186018 (Counterclockwise)

Preceding gene: 148260072

Following gene: 148260070

Centisome position: 35.03

GC content: 68.12

Gene sequence:

>1098_bases
ATGAGCGGACAATCGGAACAGGTCGAGAGAATGAGCGAGACAGTCGAAACCTCTGCACCCGCCTCGGCCCCGGCGCTCGC
GGCCCTGCTGCTGCGCTTCCGCGCCTTCGTCGCGCTGATCGTGATCATGGCGCTGTTCGCCTTTCTCTCGCCGGCGTTTC
TCACCTGGTCGAACATCATCACCGTGCTGGTGCAGTCCTCGATCAACGGCCTGCTCGCGATCGGCATGACATTCGTCATC
GTCTCCGGCGGGATCGACCTTTCGGTGGGCTCCATCGCCGGGCTTTGCGGCATGATCGTCGGCGCGCTGATCGATGTCGG
GCTGCCGGTACCGTTCCTGGGCGTGGTGATCTACCCGCATGCCTGGGCGGCGGTCGCCATCGCGCTGGCCGCCGGCGCGC
TGATCGGCGCGATCAACGGCTTCGTCATCACCAGGATGAAGGTCGCCCCCTTCATCGCGACACTCGGCATGCTCTACATC
GCGCGCGGCATCGCCCTGCTCAGCAACAACGGTTCGACCTTTCCCTTCCTCGACGGGCACAAGGCGCTCGGCAACCGGGG
CTTTCCCTGGCTCGGCAACGGGCTGCTGCTGCACATCCCGGTGCCGATCTGGCTGCTGGTGATCGCGAGCGTGGTGGCCA
CGGGCATCGCCGAGCGCACGAAGTTCGGCCGCCATGTCTACGCGATCGGCGGCAACGAGCGCGCGGCCGCGCTCTCCGGC
GTGCGGGTGCTCGCGGTGCGCGCGCGGGTCTATGTGATTTCCGGCGTGCTGGCGGCGCTGGCGGGCATCGTCATCGCCGC
GCAGCTCGACTCCGCGGGGGCGGCGGCCGGCACCGGCTACGAGCTGAACGCCATCGCCGCGGCGGTGCTCGGCGGCACGT
CGCTGATGGGCGGCAAGGGAACGATCGGCGGCAGCGTGATCGGCGCGCTGGTGATCGCCGTGCTGGTCGACGGGCTGATC
CTGCTCGGCGTGTCGGATTTCTGGCAGATGATCATTACGGGTTTCGTGATCGTGCTGGCGGTGGCGATCGATCAGGTGCA
ATTCCGCGGCGTGCGCATGCCCTGGGGCCGGCGCCGCGGCAAGGAGGTAACGCCCTGA

Upstream 100 bases:

>100_bases
CGATCGTGATGTCCGAAGGGCGCATCACGGCGGAATTCGCGCGCGGCGCCTATGACGAACAGGACCTCATGCGCGCCGCC
GCCCGCGCGCGGGAGGCCGC

Downstream 100 bases:

>100_bases
ACAGCGTTCAGGAAGTTGCGAACAATCAACGAGTTCAACAGCAAGCGGAGGAACTGACCATGAAACTGAAGACACTGCTC
GGCCCGGCCTGCCTCGGCGC

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSGQSEQVERMSETVETSAPASAPALAALLLRFRAFVALIVIMALFAFLSPAFLTWSNIITVLVQSSINGLLAIGMTFVI
VSGGIDLSVGSIAGLCGMIVGALIDVGLPVPFLGVVIYPHAWAAVAIALAAGALIGAINGFVITRMKVAPFIATLGMLYI
ARGIALLSNNGSTFPFLDGHKALGNRGFPWLGNGLLLHIPVPIWLLVIASVVATGIAERTKFGRHVYAIGGNERAAALSG
VRVLAVRARVYVISGVLAALAGIVIAAQLDSAGAAAGTGYELNAIAAAVLGGTSLMGGKGTIGGSVIGALVIAVLVDGLI
LLGVSDFWQMIITGFVIVLAVAIDQVQFRGVRMPWGRRRGKEVTP

Sequences:

>Translated_365_residues
MSGQSEQVERMSETVETSAPASAPALAALLLRFRAFVALIVIMALFAFLSPAFLTWSNIITVLVQSSINGLLAIGMTFVI
VSGGIDLSVGSIAGLCGMIVGALIDVGLPVPFLGVVIYPHAWAAVAIALAAGALIGAINGFVITRMKVAPFIATLGMLYI
ARGIALLSNNGSTFPFLDGHKALGNRGFPWLGNGLLLHIPVPIWLLVIASVVATGIAERTKFGRHVYAIGGNERAAALSG
VRVLAVRARVYVISGVLAALAGIVIAAQLDSAGAAAGTGYELNAIAAAVLGGTSLMGGKGTIGGSVIGALVIAVLVDGLI
LLGVSDFWQMIITGFVIVLAVAIDQVQFRGVRMPWGRRRGKEVTP
>Mature_364_residues
SGQSEQVERMSETVETSAPASAPALAALLLRFRAFVALIVIMALFAFLSPAFLTWSNIITVLVQSSINGLLAIGMTFVIV
SGGIDLSVGSIAGLCGMIVGALIDVGLPVPFLGVVIYPHAWAAVAIALAAGALIGAINGFVITRMKVAPFIATLGMLYIA
RGIALLSNNGSTFPFLDGHKALGNRGFPWLGNGLLLHIPVPIWLLVIASVVATGIAERTKFGRHVYAIGGNERAAALSGV
RVLAVRARVYVISGVLAALAGIVIAAQLDSAGAAAGTGYELNAIAAAVLGGTSLMGGKGTIGGSVIGALVIAVLVDGLIL
LGVSDFWQMIITGFVIVLAVAIDQVQFRGVRMPWGRRRGKEVTP

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=320, Percent_Identity=45, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1790524, Length=343, Percent_Identity=37.3177842565598, Blast_Score=171, Evalue=5e-44,
Organism=Escherichia coli, GI1788896, Length=309, Percent_Identity=34.6278317152104, Blast_Score=157, Evalue=8e-40,
Organism=Escherichia coli, GI145693152, Length=345, Percent_Identity=33.3333333333333, Blast_Score=157, Evalue=8e-40,
Organism=Escherichia coli, GI1789992, Length=397, Percent_Identity=34.0050377833753, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI87082395, Length=321, Percent_Identity=35.5140186915888, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1788471, Length=319, Percent_Identity=36.9905956112853, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1787793, Length=297, Percent_Identity=35.6902356902357, Blast_Score=121, Evalue=7e-29,
Organism=Escherichia coli, GI145693214, Length=265, Percent_Identity=36.6037735849057, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787794, Length=339, Percent_Identity=31.858407079646, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37516; Mature: 37385

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGQSEQVERMSETVETSAPASAPALAALLLRFRAFVALIVIMALFAFLSPAFLTWSNII
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLVQSSINGLLAIGMTFVIVSGGIDLSVGSIAGLCGMIVGALIDVGLPVPFLGVVIYPH
HHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH
AWAAVAIALAAGALIGAINGFVITRMKVAPFIATLGMLYIARGIALLSNNGSTFPFLDGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCH
KALGNRGFPWLGNGLLLHIPVPIWLLVIASVVATGIAERTKFGRHVYAIGGNERAAALSG
HHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH
VRVLAVRARVYVISGVLAALAGIVIAAQLDSAGAAAGTGYELNAIAAAVLGGTSLMGGKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
TIGGSVIGALVIAVLVDGLILLGVSDFWQMIITGFVIVLAVAIDQVQFRGVRMPWGRRRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC
KEVTP
CCCCC
>Mature Secondary Structure 
SGQSEQVERMSETVETSAPASAPALAALLLRFRAFVALIVIMALFAFLSPAFLTWSNII
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLVQSSINGLLAIGMTFVIVSGGIDLSVGSIAGLCGMIVGALIDVGLPVPFLGVVIYPH
HHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH
AWAAVAIALAAGALIGAINGFVITRMKVAPFIATLGMLYIARGIALLSNNGSTFPFLDGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCH
KALGNRGFPWLGNGLLLHIPVPIWLLVIASVVATGIAERTKFGRHVYAIGGNERAAALSG
HHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH
VRVLAVRARVYVISGVLAALAGIVIAAQLDSAGAAAGTGYELNAIAAAVLGGTSLMGGKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
TIGGSVIGALVIAVLVDGLILLGVSDFWQMIITGFVIVLAVAIDQVQFRGVRMPWGRRRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC
KEVTP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]