| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is nusG [H]
Identifier: 148260034
GI number: 148260034
Start: 1137080
End: 1137610
Strand: Reverse
Name: nusG [H]
Synonym: Acry_1025
Alternate gene names: 148260034
Gene position: 1137610-1137080 (Counterclockwise)
Preceding gene: 148260035
Following gene: 148260033
Centisome position: 33.57
GC content: 63.65
Gene sequence:
>531_bases ATGGCAAAACGCTGGTACGTGCTGCATGTGTATTCCGGGTTCGAGAAGAAGATCGCGACCCAGATCATGGAAACCGCGGC CCAGAAGGGGCTGGCGGACCAGATCGAGCAGGTGATGGTCCCGGCCGAGGAGGTCGTGGAGATACGCCGCGCCCAGAAGG TCAACGCCGAGCGCAAGTTCTTCCCCGGCTACGTGCTGGTGAAGATGGAAATGACCGACGACGCCTGGCACCTCGTGCGC GACATTCCGAAGGTCACCGGATTCCTCGGCACCAAGCTCAAGCCGACGCCGATTTCCGAGGCCGAGGCGCAGCGCATGCT GCAGCAGGTGCAGGAAGGCACCGAGCATCGCCGCCCCGCCGTGGTCTTCGAGATCGGCGAGCAGGTGCGCGTGGCCGACG GGCCGTTCACCAGCTTCAACGGCGTGATCGAGGATATCGACGAGGACAAGGGCCGGGTGAAGGTCTCGGTCTCGATCTTC GGGCGGTCGACGCCGGTCGAACTCGAATACGGGCAGGTCGAGAAACTCTGA
Upstream 100 bases:
>100_bases GGCGATGGTCGTGGTGACCATCGTCTTCTTCCTGGTGGTGGACCAGGTGATCGGGTTCGGCATGCGGCTGCTGTTCGGCG TCGGGAATTGAGGCAGGGTC
Downstream 100 bases:
>100_bases ACCTTTCTCCTCCGTCCTGCCGGTGACGGGGCATCACCCGGCCGGGTGATGCCGATCGCTGAACGGGTGGACGGAGCCGG GAGACGGGCATGGACGGTGC
Product: transcription antitermination protein NusG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MAKRWYVLHVYSGFEKKIATQIMETAAQKGLADQIEQVMVPAEEVVEIRRAQKVNAERKFFPGYVLVKMEMTDDAWHLVR DIPKVTGFLGTKLKPTPISEAEAQRMLQQVQEGTEHRRPAVVFEIGEQVRVADGPFTSFNGVIEDIDEDKGRVKVSVSIF GRSTPVELEYGQVEKL
Sequences:
>Translated_176_residues MAKRWYVLHVYSGFEKKIATQIMETAAQKGLADQIEQVMVPAEEVVEIRRAQKVNAERKFFPGYVLVKMEMTDDAWHLVR DIPKVTGFLGTKLKPTPISEAEAQRMLQQVQEGTEHRRPAVVFEIGEQVRVADGPFTSFNGVIEDIDEDKGRVKVSVSIF GRSTPVELEYGQVEKL >Mature_175_residues AKRWYVLHVYSGFEKKIATQIMETAAQKGLADQIEQVMVPAEEVVEIRRAQKVNAERKFFPGYVLVKMEMTDDAWHLVRD IPKVTGFLGTKLKPTPISEAEAQRMLQQVQEGTEHRRPAVVFEIGEQVRVADGPFTSFNGVIEDIDEDKGRVKVSVSIFG RSTPVELEYGQVEKL
Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]
COG id: COG0250
COG function: function code K; Transcription antiterminator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KOW domain [H]
Homologues:
Organism=Escherichia coli, GI1790414, Length=174, Percent_Identity=54.5977011494253, Blast_Score=201, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005824 - InterPro: IPR001062 - InterPro: IPR015869 - InterPro: IPR006645 - InterPro: IPR014722 - InterPro: IPR008991 [H]
Pfam domain/function: PF00467 KOW; PF02357 NusG [H]
EC number: NA
Molecular weight: Translated: 19964; Mature: 19833
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS01014 NUSG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRWYVLHVYSGFEKKIATQIMETAAQKGLADQIEQVMVPAEEVVEIRRAQKVNAERKF CCCEEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC FPGYVLVKMEMTDDAWHLVRDIPKVTGFLGTKLKPTPISEAEAQRMLQQVQEGTEHRRPA CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCE VVFEIGEQVRVADGPFTSFNGVIEDIDEDKGRVKVSVSIFGRSTPVELEYGQVEKL EEEECCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCCCCCC >Mature Secondary Structure AKRWYVLHVYSGFEKKIATQIMETAAQKGLADQIEQVMVPAEEVVEIRRAQKVNAERKF CCEEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC FPGYVLVKMEMTDDAWHLVRDIPKVTGFLGTKLKPTPISEAEAQRMLQQVQEGTEHRRPA CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCE VVFEIGEQVRVADGPFTSFNGVIEDIDEDKGRVKVSVSIFGRSTPVELEYGQVEKL EEEECCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]