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The map label for this gene is glxA [H]

Identifier: 148260010

GI number: 148260010

Start: 1110260

End: 1111234

Strand: Reverse

Name: glxA [H]

Synonym: Acry_1001

Alternate gene names: 148260010

Gene position: 1111234-1110260 (Counterclockwise)

Preceding gene: 148260011

Following gene: 148260009

Centisome position: 32.79

GC content: 71.59

Gene sequence:

>975_bases
ATGCCGCGGCCGCTGAACCCCGCCGCGCTGTCGCATTTCGGCTTCCTGCTGCTGCCGAACTATTCGATGATCGCGGTGGC
CAATGCGATCGAGGCGCTGCGGATGGCCAATCGCTGCGCCGGGCGGGCGGTGTATCGGTGGAGCCTGCACGCGGTGGGCG
AGACGCCGGTGACGGCGAGCAACGGGCTGAGCCTCGGCGCGGTGACGGCGCCGGAGTCAGGGCCGGCGCCGGATATCCTG
TTCGTCTGCGGCGGGCTCGACGTGCGCTCGGCCGTGGGGCGGCCGGTGCTCGCGGCGCTGCGCCGCGCGGCGCGGGCGGG
CACGCCGCTCGGCGCGCTCTGCACCGGCACCTTCGCGCTCGCCGCCGCCGGGCTGCTCGACGAGTATCGCTGCGCCGTCC
ACTGGGAGGACATGCCGGCGATGCGCGCCGAGTTTCCGGAGATCGAACTGGTCAACGAGCTGTTCGTGCTCGACCGCAAC
CGGCTGACCTGCACCGGCGGCACCGGGCCGCTCGACATGATGCTGGCGCTGATCGAGGCGCGGCTCGGCCGCAACGTGGC
CGAGCATGTGCGGGCGATTTTCGTGCTCGACCGGATCCGCCCGAGTGCCGAGCGCCAGCCGCTCGACAAGGACGACCGCG
GCCATGCCGGGCAGCCGATGCTGGCGCGGGCGATGGTGATGATCGAGGCGCGGCTTGGGGAAAAGCAGATTCTCGGCGAG
ATCGCGGGTGAGCTCGGCATTTCGCTGCGGCAGTTGCAGCGGCTGTTCCGCGCCCATGTCGGCGAGAGCCCGGCGGCGTT
CATCCGGGCGCGGCGGCTGAAGCGGGCGCAGGGGATGCTGCAATCGCTGCGGGTGCCGGTGACCGATGTGGCGATGGCCT
GCGGGTTCGGCTCCAGCACGCATTTCGCCAGCGCCTATCACGATTATTTCGGACATCCGCCGCGCGCCGAGCGGCGGCCG
GGAGGCATTGCATGA

Upstream 100 bases:

>100_bases
ACATGAAGCACCAGGGCGGCATCCGCCAGCGCGAGATCGACCAGGACATGATCCTGATCTGCTGCTCGACGCCGCTGACC
GATCTCGTGATCGAACGCTG

Downstream 100 bases:

>100_bases
TCGCCCACGCCGAGGCGCTGTTCCGCCCGCTGACGATCCGCCGGACGACGTTCCGCAACCGGATCATGAGCACGAGCCAC
GCGCCAGGCTACGGCCGCGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MPRPLNPAALSHFGFLLLPNYSMIAVANAIEALRMANRCAGRAVYRWSLHAVGETPVTASNGLSLGAVTAPESGPAPDIL
FVCGGLDVRSAVGRPVLAALRRAARAGTPLGALCTGTFALAAAGLLDEYRCAVHWEDMPAMRAEFPEIELVNELFVLDRN
RLTCTGGTGPLDMMLALIEARLGRNVAEHVRAIFVLDRIRPSAERQPLDKDDRGHAGQPMLARAMVMIEARLGEKQILGE
IAGELGISLRQLQRLFRAHVGESPAAFIRARRLKRAQGMLQSLRVPVTDVAMACGFGSSTHFASAYHDYFGHPPRAERRP
GGIA

Sequences:

>Translated_324_residues
MPRPLNPAALSHFGFLLLPNYSMIAVANAIEALRMANRCAGRAVYRWSLHAVGETPVTASNGLSLGAVTAPESGPAPDIL
FVCGGLDVRSAVGRPVLAALRRAARAGTPLGALCTGTFALAAAGLLDEYRCAVHWEDMPAMRAEFPEIELVNELFVLDRN
RLTCTGGTGPLDMMLALIEARLGRNVAEHVRAIFVLDRIRPSAERQPLDKDDRGHAGQPMLARAMVMIEARLGEKQILGE
IAGELGISLRQLQRLFRAHVGESPAAFIRARRLKRAQGMLQSLRVPVTDVAMACGFGSSTHFASAYHDYFGHPPRAERRP
GGIA
>Mature_323_residues
PRPLNPAALSHFGFLLLPNYSMIAVANAIEALRMANRCAGRAVYRWSLHAVGETPVTASNGLSLGAVTAPESGPAPDILF
VCGGLDVRSAVGRPVLAALRRAARAGTPLGALCTGTFALAAAGLLDEYRCAVHWEDMPAMRAEFPEIELVNELFVLDRNR
LTCTGGTGPLDMMLALIEARLGRNVAEHVRAIFVLDRIRPSAERQPLDKDDRGHAGQPMLARAMVMIEARLGEKQILGEI
AGELGISLRQLQRLFRAHVGESPAAFIRARRLKRAQGMLQSLRVPVTDVAMACGFGSSTHFASAYHDYFGHPPRAERRPG
GIA

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34929; Mature: 34798

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPLNPAALSHFGFLLLPNYSMIAVANAIEALRMANRCAGRAVYRWSLHAVGETPVTAS
CCCCCCHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCC
NGLSLGAVTAPESGPAPDILFVCGGLDVRSAVGRPVLAALRRAARAGTPLGALCTGTFAL
CCCCCCEEECCCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
AAAGLLDEYRCAVHWEDMPAMRAEFPEIELVNELFVLDRNRLTCTGGTGPLDMMLALIEA
HHHHHHHHHHHEEEECCCCHHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
RLGRNVAEHVRAIFVLDRIRPSAERQPLDKDDRGHAGQPMLARAMVMIEARLGEKQILGE
HHCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
IAGELGISLRQLQRLFRAHVGESPAAFIRARRLKRAQGMLQSLRVPVTDVAMACGFGSST
HHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
HFASAYHDYFGHPPRAERRPGGIA
HHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRPLNPAALSHFGFLLLPNYSMIAVANAIEALRMANRCAGRAVYRWSLHAVGETPVTAS
CCCCCHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCC
NGLSLGAVTAPESGPAPDILFVCGGLDVRSAVGRPVLAALRRAARAGTPLGALCTGTFAL
CCCCCCEEECCCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
AAAGLLDEYRCAVHWEDMPAMRAEFPEIELVNELFVLDRNRLTCTGGTGPLDMMLALIEA
HHHHHHHHHHHEEEECCCCHHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
RLGRNVAEHVRAIFVLDRIRPSAERQPLDKDDRGHAGQPMLARAMVMIEARLGEKQILGE
HHCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
IAGELGISLRQLQRLFRAHVGESPAAFIRARRLKRAQGMLQSLRVPVTDVAMACGFGSST
HHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
HFASAYHDYFGHPPRAERRPGGIA
HHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]