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The map label for this gene is rlpA [C]

Identifier: 148259531

GI number: 148259531

Start: 573123

End: 573737

Strand: Reverse

Name: rlpA [C]

Synonym: Acry_0515

Alternate gene names: 148259531

Gene position: 573737-573123 (Counterclockwise)

Preceding gene: 148259532

Following gene: 148259527

Centisome position: 16.93

GC content: 69.92

Gene sequence:

>615_bases
ATGGGCGCGATCATTCTCTGTACGGCAGGGCTTGCCGCATGCGCCGCCAAGGCGCCGCAGGCCAGTCTCGCCATGCCGCC
GCCTGCCGAACCGCCTACGCAGGCACTTCCCGCGCTGACCGTCGCAAAACGGCTGAGTACGATGCCTCCCGTCGCGGTGC
CGGCCGTTCTCCGCCCGCCGCTCGATCTCTCGGGACGCAACGAGACCGGCAAGGCCTCCTATTACGCCCGCCGTTTTGCC
GGCCGGCGCACCGCCGATGGCCAGCGCTTCAATCCGCACGCGCCGATGGCCGCCAGCAAGACGCTGCCGCTCGGCACGGT
TGCCAAGGTCGTCAACCTGTCCAACGGCACGAGCACGACCGTCACGGTCGCCGACCGGGGGCCGAATGTCGAAAGCCGCA
TGCTCGATGTCAGTCCGGAGGTCGCGATCCGCCTCGGCATGATCCGGGAAGGCGTTGCGCGGGTTCTGGTCGAGCCGATC
ACCATCCCGGAGCCGGATGGCAAGGTGAAGCTCGGCGCGGGCGCGGCGCATGCCTCGAAGGCACAGATCGCGGCCGCCAT
CGGAACCTCCCGGCGCGTGATGCGCCAGGACGGGATCCGGGTCGCGGACCGGTGA

Upstream 100 bases:

>100_bases
TTCCTCATAACCTCTGCCCATGGACACATCACCAAGATGCGCCCTTGAGTCGGGAGAGCAGAATGTCGCGGTCGAGCGTC
GGTCCGGAGCATGGCTCAGG

Downstream 100 bases:

>100_bases
GCCGCGCGCCCCTCGTCTGACGACGTCCTTTCCGCCCGATCGCAACGCTCGCCAAGGTGCCGGCGAGCCTATCTCGCGTG
CGCCCTCAACGCGCACATCA

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MGAIILCTAGLAACAAKAPQASLAMPPPAEPPTQALPALTVAKRLSTMPPVAVPAVLRPPLDLSGRNETGKASYYARRFA
GRRTADGQRFNPHAPMAASKTLPLGTVAKVVNLSNGTSTTVTVADRGPNVESRMLDVSPEVAIRLGMIREGVARVLVEPI
TIPEPDGKVKLGAGAAHASKAQIAAAIGTSRRVMRQDGIRVADR

Sequences:

>Translated_204_residues
MGAIILCTAGLAACAAKAPQASLAMPPPAEPPTQALPALTVAKRLSTMPPVAVPAVLRPPLDLSGRNETGKASYYARRFA
GRRTADGQRFNPHAPMAASKTLPLGTVAKVVNLSNGTSTTVTVADRGPNVESRMLDVSPEVAIRLGMIREGVARVLVEPI
TIPEPDGKVKLGAGAAHASKAQIAAAIGTSRRVMRQDGIRVADR
>Mature_203_residues
GAIILCTAGLAACAAKAPQASLAMPPPAEPPTQALPALTVAKRLSTMPPVAVPAVLRPPLDLSGRNETGKASYYARRFAG
RRTADGQRFNPHAPMAASKTLPLGTVAKVVNLSNGTSTTVTVADRGPNVESRMLDVSPEVAIRLGMIREGVARVLVEPIT
IPEPDGKVKLGAGAAHASKAQIAAAIGTSRRVMRQDGIRVADR

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 21125; Mature: 20994

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAIILCTAGLAACAAKAPQASLAMPPPAEPPTQALPALTVAKRLSTMPPVAVPAVLRPP
CCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCC
LDLSGRNETGKASYYARRFAGRRTADGQRFNPHAPMAASKTLPLGTVAKVVNLSNGTSTT
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEE
VTVADRGPNVESRMLDVSPEVAIRLGMIREGVARVLVEPITIPEPDGKVKLGAGAAHASK
EEEECCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHH
AQIAAAIGTSRRVMRQDGIRVADR
HHHHHHHHHHHHHHHHCCEEECCC
>Mature Secondary Structure 
GAIILCTAGLAACAAKAPQASLAMPPPAEPPTQALPALTVAKRLSTMPPVAVPAVLRPP
CEEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCC
LDLSGRNETGKASYYARRFAGRRTADGQRFNPHAPMAASKTLPLGTVAKVVNLSNGTSTT
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEE
VTVADRGPNVESRMLDVSPEVAIRLGMIREGVARVLVEPITIPEPDGKVKLGAGAAHASK
EEEECCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHH
AQIAAAIGTSRRVMRQDGIRVADR
HHHHHHHHHHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]