| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is yagS [H]
Identifier: 148259526
GI number: 148259526
Start: 569007
End: 570050
Strand: Reverse
Name: yagS [H]
Synonym: Acry_0510
Alternate gene names: 148259526
Gene position: 570050-569007 (Counterclockwise)
Preceding gene: 148259527
Following gene: 148259525
Centisome position: 16.82
GC content: 73.08
Gene sequence:
>1044_bases ATGACCCCCTTCGCCTATCTCCGCCCCGCCACGCTCGATGAAGCCATCGGCGCCTGGGAACCGGGCGCGGCGTATCTCGC CGGCGGGACCAACCTGGTCGATCTGATGAAGACCGGCACGCTGCGGCCGGCCAAGCTGATCGACCTTGCCCGCCTGCCCG GCCTCGACGCGATCGAGACGCTGGAGGACGGCAGTGTCCGGGTCGGCGCGCTGGTGCGGAATGCCGATCTCGCCCATGAC ATTACCTTCGCCGCGCAGTTCCCGATGGTCGCCGAGGCGCTGCTCTCGGGAGCTTCGGGCCAGTTGCGCAACGCCGCGAC CGTGGGCGGCAACCTGCTGCAGCACCCGCGCTGCGCCTATTTCCAGGACCCGCTGAGCGCCTGCAACCGCCGTGCGCCCG GCAGCGGATGCGATGCGCGGGACGGCGACAACGCCGCCCTCGCGGTCATGGGCTGGAGTGAAGCCTGCATCGCCACCAGC GCGTCGGATTTCTGCGTTCCCCTTGCCGCGCTCGATGCCGTGGTCGAAACCGCCGGCCCGGCGGGAGCGCGCGAGATCCC CTTCGCCGAGCTTCATCGGCTGCCGGGCGATTCCCCCGAACGCGCGACCGCGCTTGGGCCGGGTGAACTCATAGTCGCCC TGCGCCTGCCCGCCGCCGCGTCCGCCTTCCGCGCCCATGCGCGCTATCTCAAGCTGCGCGAGCGCACCTCGTTCGCCTTC GCGCTGGTCTCGGCCGCCGCGGCGCTGCGTCTTGATCGCGGCCGGATCGCCGAGGCCAGGCTCGCGCTCGGTGCTGTCGC CGCGAAGCCCTGGCGCAGCCGGGAAGCGGAGGCGATGCTGGCCGGCGCCGCCCCGGCGCCCGAACTCTTCGCCCGCGCCG CCGCCGTGGCGCTTTCCGGCGCCACCCCGTCGGGGGCGAATGCCCACAAGATTGAACTCGCCCGTCGCACCGCGGCCCGG GCTCTGGCGCTCGCCGCCGCGGGTACGCCCGCCCGGATGCCGGCGCTGCCCGCCTCGCCCTTCGGAGACCTCGCTCATGT CTGA
Upstream 100 bases:
>100_bases TGAGCGGCAATCTATGCCGCTGCGGCGCCTATCACGGCATCACCGAGGCCGTGCAGGACGCCACGAGACGCATGGCGGAT ACCAGCGCAGGAGACGCCGC
Downstream 100 bases:
>100_bases GACTTCCATCCGCTTCGGCTCGAACGCCGGCCAGTCCGTCACCCGCCGCGACGGCATCGCCAAGGTTACCGGCGCCGCCA CTTTCGCAGCCGACAATCAC
Product: molybdopterin dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTPFAYLRPATLDEAIGAWEPGAAYLAGGTNLVDLMKTGTLRPAKLIDLARLPGLDAIETLEDGSVRVGALVRNADLAHD ITFAAQFPMVAEALLSGASGQLRNAATVGGNLLQHPRCAYFQDPLSACNRRAPGSGCDARDGDNAALAVMGWSEACIATS ASDFCVPLAALDAVVETAGPAGAREIPFAELHRLPGDSPERATALGPGELIVALRLPAAASAFRAHARYLKLRERTSFAF ALVSAAAALRLDRGRIAEARLALGAVAAKPWRSREAEAMLAGAAPAPELFARAAAVALSGATPSGANAHKIELARRTAAR ALALAAAGTPARMPALPASPFGDLAHV
Sequences:
>Translated_347_residues MTPFAYLRPATLDEAIGAWEPGAAYLAGGTNLVDLMKTGTLRPAKLIDLARLPGLDAIETLEDGSVRVGALVRNADLAHD ITFAAQFPMVAEALLSGASGQLRNAATVGGNLLQHPRCAYFQDPLSACNRRAPGSGCDARDGDNAALAVMGWSEACIATS ASDFCVPLAALDAVVETAGPAGAREIPFAELHRLPGDSPERATALGPGELIVALRLPAAASAFRAHARYLKLRERTSFAF ALVSAAAALRLDRGRIAEARLALGAVAAKPWRSREAEAMLAGAAPAPELFARAAAVALSGATPSGANAHKIELARRTAAR ALALAAAGTPARMPALPASPFGDLAHV >Mature_346_residues TPFAYLRPATLDEAIGAWEPGAAYLAGGTNLVDLMKTGTLRPAKLIDLARLPGLDAIETLEDGSVRVGALVRNADLAHDI TFAAQFPMVAEALLSGASGQLRNAATVGGNLLQHPRCAYFQDPLSACNRRAPGSGCDARDGDNAALAVMGWSEACIATSA SDFCVPLAALDAVVETAGPAGAREIPFAELHRLPGDSPERATALGPGELIVALRLPAAASAFRAHARYLKLRERTSFAFA LVSAAAALRLDRGRIAEARLALGAVAAKPWRSREAEAMLAGAAPAPELFARAAAVALSGATPSGANAHKIELARRTAARA LALAAAGTPARMPALPASPFGDLAHV
Specific function: Unknown
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1786479, Length=332, Percent_Identity=47.8915662650602, Blast_Score=244, Evalue=7e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.17.1.4 [H]
Molecular weight: Translated: 35672; Mature: 35541
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFAYLRPATLDEAIGAWEPGAAYLAGGTNLVDLMKTGTLRPAKLIDLARLPGLDAIET CCCCCCCCCCHHHHHHCCCCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCHHHH LEDGSVRVGALVRNADLAHDITFAAQFPMVAEALLSGASGQLRNAATVGGNLLQHPRCAY HCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCHHH FQDPLSACNRRAPGSGCDARDGDNAALAVMGWSEACIATSASDFCVPLAALDAVVETAGP HHCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHCCC AGAREIPFAELHRLPGDSPERATALGPGELIVALRLPAAASAFRAHARYLKLRERTSFAF CCCCCCCHHHHHCCCCCCCCCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH ALVSAAAALRLDRGRIAEARLALGAVAAKPWRSREAEAMLAGAAPAPELFARAAAVALSG HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHEECCCCCHHHHHHHHHHHCCC ATPSGANAHKIELARRTAARALALAAAGTPARMPALPASPFGDLAHV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure TPFAYLRPATLDEAIGAWEPGAAYLAGGTNLVDLMKTGTLRPAKLIDLARLPGLDAIET CCCCCCCCCHHHHHHCCCCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCHHHH LEDGSVRVGALVRNADLAHDITFAAQFPMVAEALLSGASGQLRNAATVGGNLLQHPRCAY HCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCHHH FQDPLSACNRRAPGSGCDARDGDNAALAVMGWSEACIATSASDFCVPLAALDAVVETAGP HHCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHCCC AGAREIPFAELHRLPGDSPERATALGPGELIVALRLPAAASAFRAHARYLKLRERTSFAF CCCCCCCHHHHHCCCCCCCCCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH ALVSAAAALRLDRGRIAEARLALGAVAAKPWRSREAEAMLAGAAPAPELFARAAAVALSG HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHEECCCCCHHHHHHHHHHHCCC ATPSGANAHKIELARRTAARALALAAAGTPARMPALPASPFGDLAHV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]