| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259505
Identifier: 148259505
GI number: 148259505
Start: 542505
End: 543035
Strand: Reverse
Name: 148259505
Synonym: Acry_0489
Alternate gene names: NA
Gene position: 543035-542505 (Counterclockwise)
Preceding gene: 148259507
Following gene: 148259503
Centisome position: 16.02
GC content: 67.98
Gene sequence:
>531_bases ATGAACCCTGTATTCCGATATGCCGCCCTGGCCGCGATGCTGGCCCTCGCCGGCTGCTCGAGCACGGCACGCGCTCCCGA AAGCGCCGCCCTCGGGCCGGCGGATCTCGCTTTCATCACGAGTGCGTATCAGCTCGTGCAGTTCGACATCGACGCCTGCT CCTTCGTCCGCAAGGGGCCGATCGAGCCCGCGGCGATGCCCGCGGTGGACAAGGTCTGCGCCGATGCAGCGACCTACAAG CCGCAGCTGCGCGCCCTTGCGGCCCAGGAGGGCGTGACGCTGCCGAACACGCTGCCCTTTGACCTCAAGGAAAAGCTCGT CTCGCTCAGCTATCATCCCGAGCCGAACCTGACCGTCGAGTTCCTGCGCGACGAGATCAGCAGCCATGAGAGCGCTATCG CGGTGTTCCAGGGCGAACTGCGCGAGGGACGCAACGCGGCCTTCCGGCAGAAGGCGCAGGAGGCGCTGCCGGTGCTGGAG CGCAACCTCGCCATGCTGCGCGCCGCCCTGCCCACCGGCACCGCGGAATGA
Upstream 100 bases:
>100_bases TAAAATGGCGGCGGACCGGATGCGATGAATCAATGACGGTCGCGAGTCGGCGTGCCAGCGTTATTCTGTAAACGCACGGC TTTCTCATGGAGACAAGATC
Downstream 100 bases:
>100_bases GAAAAGCCCGGGCCTGAGGCCCGGGCTTCCCGCCATTCCGAAGGGGGTGAGGTCAGAAGACCTTGCCGACCTGGACCTGG AAGAAGATGTCGTTCTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MNPVFRYAALAAMLALAGCSSTARAPESAALGPADLAFITSAYQLVQFDIDACSFVRKGPIEPAAMPAVDKVCADAATYK PQLRALAAQEGVTLPNTLPFDLKEKLVSLSYHPEPNLTVEFLRDEISSHESAIAVFQGELREGRNAAFRQKAQEALPVLE RNLAMLRAALPTGTAE
Sequences:
>Translated_176_residues MNPVFRYAALAAMLALAGCSSTARAPESAALGPADLAFITSAYQLVQFDIDACSFVRKGPIEPAAMPAVDKVCADAATYK PQLRALAAQEGVTLPNTLPFDLKEKLVSLSYHPEPNLTVEFLRDEISSHESAIAVFQGELREGRNAAFRQKAQEALPVLE RNLAMLRAALPTGTAE >Mature_176_residues MNPVFRYAALAAMLALAGCSSTARAPESAALGPADLAFITSAYQLVQFDIDACSFVRKGPIEPAAMPAVDKVCADAATYK PQLRALAAQEGVTLPNTLPFDLKEKLVSLSYHPEPNLTVEFLRDEISSHESAIAVFQGELREGRNAAFRQKAQEALPVLE RNLAMLRAALPTGTAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18860; Mature: 18860
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVFRYAALAAMLALAGCSSTARAPESAALGPADLAFITSAYQLVQFDIDACSFVRKGP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC IEPAAMPAVDKVCADAATYKPQLRALAAQEGVTLPNTLPFDLKEKLVSLSYHPEPNLTVE CCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHH FLRDEISSHESAIAVFQGELREGRNAAFRQKAQEALPVLERNLAMLRAALPTGTAE HHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNPVFRYAALAAMLALAGCSSTARAPESAALGPADLAFITSAYQLVQFDIDACSFVRKGP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC IEPAAMPAVDKVCADAATYKPQLRALAAQEGVTLPNTLPFDLKEKLVSLSYHPEPNLTVE CCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHH FLRDEISSHESAIAVFQGELREGRNAAFRQKAQEALPVLERNLAMLRAALPTGTAE HHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA