| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is purC
Identifier: 148259410
GI number: 148259410
Start: 450323
End: 451087
Strand: Reverse
Name: purC
Synonym: Acry_0393
Alternate gene names: 148259410
Gene position: 451087-450323 (Counterclockwise)
Preceding gene: 148259411
Following gene: 148259409
Centisome position: 13.31
GC content: 60.0
Gene sequence:
>765_bases ATGGCGCGTCGCCGGCAACTTTATGAAGGCAAGGCAAAAATCCTGTTCGAAGGGCCGGAACCCGGCACCCTCGTGCAGTA TTTCAAGGACGACGCCACCGCGTTCAACGCCCAGAAGAAGGGCGTGATCACGGGGAAGGGCGTGTTGAACAACCGCATCA GCGAGTTCCTGATGCAGCGCCTCGGCGAAATCGGCATCCCGACCCATTTCGTCCGCCGCCTCAACATGCGCGAACAACTC GTGCGCGAGGTCGAGATCATTCCGATCGAGGTCGTCATTCGCAACGTTGCCGCGGGCAGCATGAGCACGCGCCTCGGCAT CCCTGAGGGTACGCGGCTCCCCCGATCGATCATCGAATATTATTACAAGAACGACGCCCTGAACGATCCGATGGTGTCCG AGGACCACATCACCGCGTTCGGCTGGGCCAGCACCCAGGATATGGATGACATTGTCCATCTGAGCCTGCGCATCAACGAC TTTCTCACTGGCCTGTTCCTCGGCGTCGGCATCGTGCTGGTGGACTTCAAGATCGAGTTCGGCCGGCTGTGGGAGAACGA CGATATGCGCATCGTCCTCGCCGACGAAATCAGCCCGGACAATTGCCGTCTCTGGGATGCCAAGACCAACGAGAAGATGG ACAAGGACCGCTTCCGCCGCGATCTCGGCCGGGTTGAGGAAGCATATCAGGAAGTCGCCAAGCGTCTCGGAATCCTGCCC GAGGCCGGGACACGCGATATGAAGGGCCCGGAGACGATGCAATGA
Upstream 100 bases:
>100_bases CGTCTGCCTCCGGGCATGGCGCAAACCGCTGCCGGTTGATATACCCGGTCGCGTGCGGCCTCACCGTTTCCCATCAGCCG CCGAGATACGAGGTTCACCC
Downstream 100 bases:
>100_bases AGGTTCTGGTCGCCGTGAAGCTGAAGGCCGGCGTGCTCGATCCGCAGGGCAAGGCCATCGGCCACGCGCTCGAAGGGCTT GGATACAATGACGTGAACGA
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MARRRQLYEGKAKILFEGPEPGTLVQYFKDDATAFNAQKKGVITGKGVLNNRISEFLMQRLGEIGIPTHFVRRLNMREQL VREVEIIPIEVVIRNVAAGSMSTRLGIPEGTRLPRSIIEYYYKNDALNDPMVSEDHITAFGWASTQDMDDIVHLSLRIND FLTGLFLGVGIVLVDFKIEFGRLWENDDMRIVLADEISPDNCRLWDAKTNEKMDKDRFRRDLGRVEEAYQEVAKRLGILP EAGTRDMKGPETMQ
Sequences:
>Translated_254_residues MARRRQLYEGKAKILFEGPEPGTLVQYFKDDATAFNAQKKGVITGKGVLNNRISEFLMQRLGEIGIPTHFVRRLNMREQL VREVEIIPIEVVIRNVAAGSMSTRLGIPEGTRLPRSIIEYYYKNDALNDPMVSEDHITAFGWASTQDMDDIVHLSLRIND FLTGLFLGVGIVLVDFKIEFGRLWENDDMRIVLADEISPDNCRLWDAKTNEKMDKDRFRRDLGRVEEAYQEVAKRLGILP EAGTRDMKGPETMQ >Mature_253_residues ARRRQLYEGKAKILFEGPEPGTLVQYFKDDATAFNAQKKGVITGKGVLNNRISEFLMQRLGEIGIPTHFVRRLNMREQLV REVEIIPIEVVIRNVAAGSMSTRLGIPEGTRLPRSIIEYYYKNDALNDPMVSEDHITAFGWASTQDMDDIVHLSLRINDF LTGLFLGVGIVLVDFKIEFGRLWENDDMRIVLADEISPDNCRLWDAKTNEKMDKDRFRRDLGRVEEAYQEVAKRLGILPE AGTRDMKGPETMQ
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family
Homologues:
Organism=Homo sapiens, GI119220557, Length=251, Percent_Identity=34.2629482071713, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI5453539, Length=251, Percent_Identity=34.2629482071713, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI119220559, Length=258, Percent_Identity=32.9457364341085, Blast_Score=110, Evalue=1e-24, Organism=Escherichia coli, GI1788820, Length=238, Percent_Identity=44.5378151260504, Blast_Score=213, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17531275, Length=234, Percent_Identity=32.4786324786325, Blast_Score=90, Evalue=9e-19, Organism=Drosophila melanogaster, GI18860083, Length=239, Percent_Identity=33.0543933054393, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24583917, Length=247, Percent_Identity=27.9352226720648, Blast_Score=82, Evalue=3e-16,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): PUR7_ACICJ (A5FVI6)
Other databases:
- EMBL: CP000697 - RefSeq: YP_001233537.1 - ProteinModelPortal: A5FVI6 - SMR: A5FVI6 - STRING: A5FVI6 - GeneID: 5159693 - GenomeReviews: CP000697_GR - KEGG: acr:Acry_0393 - eggNOG: COG0152 - HOGENOM: HBG306070 - OMA: YKDDALG - ProtClustDB: PRK09362 - BioCyc: ACRY349163:ACRY_0393-MONOMER - HAMAP: MF_00137 - InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 - Gene3D: G3DSA:3.30.470.20 - PANTHER: PTHR11609 - TIGRFAMs: TIGR00081
Pfam domain/function: PF01259 SAICAR_synt
EC number: =6.3.2.6
Molecular weight: Translated: 29078; Mature: 28947
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS01057 SAICAR_SYNTHETASE_1; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRRQLYEGKAKILFEGPEPGTLVQYFKDDATAFNAQKKGVITGKGVLNNRISEFLMQR CCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHH LGEIGIPTHFVRRLNMREQLVREVEIIPIEVVIRNVAAGSMSTRLGIPEGTRLPRSIIEY HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHH YYKNDALNDPMVSEDHITAFGWASTQDMDDIVHLSLRINDFLTGLFLGVGIVLVDFKIEF HHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE GRLWENDDMRIVLADEISPDNCRLWDAKTNEKMDKDRFRRDLGRVEEAYQEVAKRLGILP CCCCCCCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EAGTRDMKGPETMQ CCCCCCCCCCCCCC >Mature Secondary Structure ARRRQLYEGKAKILFEGPEPGTLVQYFKDDATAFNAQKKGVITGKGVLNNRISEFLMQR CCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHH LGEIGIPTHFVRRLNMREQLVREVEIIPIEVVIRNVAAGSMSTRLGIPEGTRLPRSIIEY HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHH YYKNDALNDPMVSEDHITAFGWASTQDMDDIVHLSLRINDFLTGLFLGVGIVLVDFKIEF HHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE GRLWENDDMRIVLADEISPDNCRLWDAKTNEKMDKDRFRRDLGRVEEAYQEVAKRLGILP CCCCCCCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EAGTRDMKGPETMQ CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA