| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259328
Identifier: 148259328
GI number: 148259328
Start: 359727
End: 360776
Strand: Reverse
Name: 148259328
Synonym: Acry_0309
Alternate gene names: NA
Gene position: 360776-359727 (Counterclockwise)
Preceding gene: 148259329
Following gene: 148259327
Centisome position: 10.64
GC content: 76.95
Gene sequence:
>1050_bases ATGACACGATTTTTTGGCTCCGGCGCGCGGCGCCTTGGCTTGCTGCTGGTGGCCGGTGCGGGGTTCGCGGGCCATGCCGC GCTGGCCGAGGGACCGAGCGTGCTGGTCACCACCGCGCCGGTGACGCAGGGGGCGCTGGAGCGGAGCGTGACGGCCTATG GAAGGATCGCGCCGGGGGCGGGCGCGGCGCGGACGCTCGCCACCGCCTATGCCGCGACGGTGACGGCGGTGGAGGCGCGG CCGGGCATGAGTGTGCGCAGGGGGCAGGTGATCGCCCGGATCGAGACCGCGCCGGCGACCCGCGCCGCCTATGCGCAGGC CGTCGCCACGCGGGATGAGACGCTGCGGGTGCTCGCCCATACGCGCGCGCTGCTGGCCCGGCACCTCGCCACGCGGACCC AGTTCGCGCAGGCGGAACAGGCGGCGCGGGCGGTGCTTGCGGCGCTCGACGCGCTGAAGCGCGAGGGGGCGGATCGGGCC ATGGCGACGGTCGAGGCGCCGTTCGCCGGCATCGTCACCGCGATTTCGGCCGCGCCCGGCGCCGCGTTGCCGGCGGGGAC GGCGATCGCCACGGTGGTGCGGCGGGCGGGGCTGGTCGCGGTGGTCGGCGTCGATCCGGGCGACGCCCGGCGGCTTGCCG CCGGCCAGGCGGCGCTTGTGCAGGTGTTGGGCGGTGCGGCGCTGCGCGGGCGGATCGACATGCTCGCCGGCGAGGTCGAT CCGCGCACCGGGCTGGTGGATGCGACGGTCGGGCTCGGCGGCGCGCCGGCGCTGGTCGGCGCCATGGTCCGCGCGCGCAT CGATACCGGCACGGTGCGCGGGGTGATCGTGCCGCGCGACGCCGCGCTGCCGGCGGCGGGGCGCGACGTGATCTGGCAGG TCAGGGACGGGCATGCGGTGCGCGTCGTGGTGCGGGTGCTAGCGAGCGCGCGGGGGCGGAGCATCGTCGCCGGGCGGATC GATCCGGCGCTGCCGGTCGTGGTCTCGGGCAATTACCAGCTGCGGCCGGGCATCGCCGTGCGGATCGCGCGGCCGGGACA GGGCGGATGA
Upstream 100 bases:
>100_bases CGGGCCCGCATCGCGGCCGGGCGGGTGTCGCTGCGCACGCTGCTCGGCGCCGGGCTGCCGGTGATCCGCTCACTCTCCGC TTCCGGCAAGGACTGATGCG
Downstream 100 bases:
>100_bases TGGGGGGATTCGCCGCGTTTCTCGGCCGCCAGCAGAAGGCGATCCTGTTCCTGATGGCGAGCCTCGCCCTGGCCGGGGCG GTCGGCGCGCTGTCGCTGCC
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTRFFGSGARRLGLLLVAGAGFAGHAALAEGPSVLVTTAPVTQGALERSVTAYGRIAPGAGAARTLATAYAATVTAVEAR PGMSVRRGQVIARIETAPATRAAYAQAVATRDETLRVLAHTRALLARHLATRTQFAQAEQAARAVLAALDALKREGADRA MATVEAPFAGIVTAISAAPGAALPAGTAIATVVRRAGLVAVVGVDPGDARRLAAGQAALVQVLGGAALRGRIDMLAGEVD PRTGLVDATVGLGGAPALVGAMVRARIDTGTVRGVIVPRDAALPAAGRDVIWQVRDGHAVRVVVRVLASARGRSIVAGRI DPALPVVVSGNYQLRPGIAVRIARPGQGG
Sequences:
>Translated_349_residues MTRFFGSGARRLGLLLVAGAGFAGHAALAEGPSVLVTTAPVTQGALERSVTAYGRIAPGAGAARTLATAYAATVTAVEAR PGMSVRRGQVIARIETAPATRAAYAQAVATRDETLRVLAHTRALLARHLATRTQFAQAEQAARAVLAALDALKREGADRA MATVEAPFAGIVTAISAAPGAALPAGTAIATVVRRAGLVAVVGVDPGDARRLAAGQAALVQVLGGAALRGRIDMLAGEVD PRTGLVDATVGLGGAPALVGAMVRARIDTGTVRGVIVPRDAALPAAGRDVIWQVRDGHAVRVVVRVLASARGRSIVAGRI DPALPVVVSGNYQLRPGIAVRIARPGQGG >Mature_348_residues TRFFGSGARRLGLLLVAGAGFAGHAALAEGPSVLVTTAPVTQGALERSVTAYGRIAPGAGAARTLATAYAATVTAVEARP GMSVRRGQVIARIETAPATRAAYAQAVATRDETLRVLAHTRALLARHLATRTQFAQAEQAARAVLAALDALKREGADRAM ATVEAPFAGIVTAISAAPGAALPAGTAIATVVRRAGLVAVVGVDPGDARRLAAGQAALVQVLGGAALRGRIDMLAGEVDP RTGLVDATVGLGGAPALVGAMVRARIDTGTVRGVIVPRDAALPAAGRDVIWQVRDGHAVRVVVRVLASARGRSIVAGRID PALPVVVSGNYQLRPGIAVRIARPGQGG
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35226; Mature: 35095
Theoretical pI: Translated: 12.19; Mature: 12.19
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFFGSGARRLGLLLVAGAGFAGHAALAEGPSVLVTTAPVTQGALERSVTAYGRIAPGA CCCCCCCCHHHEEEEEEECCCCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCC GAARTLATAYAATVTAVEARPGMSVRRGQVIARIETAPATRAAYAQAVATRDETLRVLAH CHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH TRALLARHLATRTQFAQAEQAARAVLAALDALKREGADRAMATVEAPFAGIVTAISAAPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCC AALPAGTAIATVVRRAGLVAVVGVDPGDARRLAAGQAALVQVLGGAALRGRIDMLAGEVD CCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHCHHHHHHCCCC PRTGLVDATVGLGGAPALVGAMVRARIDTGTVRGVIVPRDAALPAAGRDVIWQVRDGHAV CCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHH RVVVRVLASARGRSIVAGRIDPALPVVVSGNYQLRPGIAVRIARPGQGG HHHHHHHHHCCCCEEEEECCCCCCEEEECCCEEECCCEEEEEECCCCCC >Mature Secondary Structure TRFFGSGARRLGLLLVAGAGFAGHAALAEGPSVLVTTAPVTQGALERSVTAYGRIAPGA CCCCCCCHHHEEEEEEECCCCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCC GAARTLATAYAATVTAVEARPGMSVRRGQVIARIETAPATRAAYAQAVATRDETLRVLAH CHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH TRALLARHLATRTQFAQAEQAARAVLAALDALKREGADRAMATVEAPFAGIVTAISAAPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCC AALPAGTAIATVVRRAGLVAVVGVDPGDARRLAAGQAALVQVLGGAALRGRIDMLAGEVD CCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHCHHHHHHCCCC PRTGLVDATVGLGGAPALVGAMVRARIDTGTVRGVIVPRDAALPAAGRDVIWQVRDGHAV CCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHH RVVVRVLASARGRSIVAGRIDPALPVVVSGNYQLRPGIAVRIARPGQGG HHHHHHHHHCCCCEEEEECCCCCCEEEECCCEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA