| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259276
Identifier: 148259276
GI number: 148259276
Start: 295076
End: 296074
Strand: Reverse
Name: 148259276
Synonym: Acry_0256
Alternate gene names: NA
Gene position: 296074-295076 (Counterclockwise)
Preceding gene: 148259277
Following gene: 148259275
Centisome position: 8.74
GC content: 75.38
Gene sequence:
>999_bases ATGCGCCGTCTCGCTTCGCTTGTTCTCGCCTGCCTGTTCGGCATGCCCTTCGCCGCGCACGCCGCATCGCTCACGCTGTA TTCGCGGCTTGATTATGCGCCCGCCGTCGCCCGCGCCTTCACCGCGAAGACCGGGATCGCCGTGCGCGTGCGCCGCCCGC CGCCGACCGGCCTCGCCGACCGGATCGAGCGCGAGGGCGCGCACCCGCGATGGGCGCTCGCCTGGTTCGCCGGCACGCCG AACGCCGTGGCCCTCGACGCGCGGGGGCTGCTGGCGCGCCATCTGCCGGTGCCGGCCGGCCTCTCGCCCCGCGCCGCCGC CCTCATTCCGGCGGATGGCAGCGCAATCCCGACCGGACTCGAACTCGGCGGCGTGGTGCTGATGTCGAAATCGGCGCCGT TCACGCCGCCGCTGCACTGGCACGGCCTGCTCGCGCCGGCCCGCCGCGGACTCACGGGCATGGCCGACCCGACGACGGAC GACGCAGCCTGGGGCGGCCTCGCGAGCCTGCTGGCCACCGAGGGCTGGCCGGACGGGCGCCGCTTCGTCACCGCGCTCGG CGGCGCCGGGCTGCATATCTACGCCACCACGGCGGACACCGTCGCCGCCCTGCGCAGCGGGGCCATCCAGCTCGCCCTCG TCCGCTCCGCCGTGGCCTTCCACGTCGCTTCCCGAATCGATCCCTCGCTCGAAGCCGTCGTGCCGGCTCCAGCCGTGCTG ATGCCGAGCCTGATCGTGATGCCGCGGCACATGACGCCGGCCTTGCGGCGGGCGGCGTCGGCGTTCATCGCCTTTGCCTG CTCGCCCGCCGGCCAGCGCGCGGCGCTCGCGTCCGACGACATGGATTCAGCCTTCTGGCCGGTGAACGCGACGGTGCCGC CGCCGCCAGGCCTGCCGGACCTCGCCGCCCTCGCCCCGCGCGATCCGGCCGCGGTCGCCGCCAACCCGCTGCCGGCGATC GCCTGGTTCGCGCGCGAAATGGTCGGCCCCGGCCTCTGA
Upstream 100 bases:
>100_bases ACCGCGAGGACACGCCCTGGTACCCGTCGCTGCGCCTGTTCCGCCAGGAGCACCCCTCCGACTGGTCCGGCGTCGTCGAA CGGGTTGCCGGGAGTCTCTG
Downstream 100 bases:
>100_bases CACCGCGAAGGCGGGCCGGGGGTCTTGCATCGCCCCCGACCGCAAGCGATAAACGCTTAACCAATGGTGCAGGCTGCGGC CATCCAAGCGGAGGAAACAT
Product: ABC-type Fe3+ transport system periplasmic component-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MRRLASLVLACLFGMPFAAHAASLTLYSRLDYAPAVARAFTAKTGIAVRVRRPPPTGLADRIEREGAHPRWALAWFAGTP NAVALDARGLLARHLPVPAGLSPRAAALIPADGSAIPTGLELGGVVLMSKSAPFTPPLHWHGLLAPARRGLTGMADPTTD DAAWGGLASLLATEGWPDGRRFVTALGGAGLHIYATTADTVAALRSGAIQLALVRSAVAFHVASRIDPSLEAVVPAPAVL MPSLIVMPRHMTPALRRAASAFIAFACSPAGQRAALASDDMDSAFWPVNATVPPPPGLPDLAALAPRDPAAVAANPLPAI AWFAREMVGPGL
Sequences:
>Translated_332_residues MRRLASLVLACLFGMPFAAHAASLTLYSRLDYAPAVARAFTAKTGIAVRVRRPPPTGLADRIEREGAHPRWALAWFAGTP NAVALDARGLLARHLPVPAGLSPRAAALIPADGSAIPTGLELGGVVLMSKSAPFTPPLHWHGLLAPARRGLTGMADPTTD DAAWGGLASLLATEGWPDGRRFVTALGGAGLHIYATTADTVAALRSGAIQLALVRSAVAFHVASRIDPSLEAVVPAPAVL MPSLIVMPRHMTPALRRAASAFIAFACSPAGQRAALASDDMDSAFWPVNATVPPPPGLPDLAALAPRDPAAVAANPLPAI AWFAREMVGPGL >Mature_332_residues MRRLASLVLACLFGMPFAAHAASLTLYSRLDYAPAVARAFTAKTGIAVRVRRPPPTGLADRIEREGAHPRWALAWFAGTP NAVALDARGLLARHLPVPAGLSPRAAALIPADGSAIPTGLELGGVVLMSKSAPFTPPLHWHGLLAPARRGLTGMADPTTD DAAWGGLASLLATEGWPDGRRFVTALGGAGLHIYATTADTVAALRSGAIQLALVRSAVAFHVASRIDPSLEAVVPAPAVL MPSLIVMPRHMTPALRRAASAFIAFACSPAGQRAALASDDMDSAFWPVNATVPPPPGLPDLAALAPRDPAAVAANPLPAI AWFAREMVGPGL
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34296; Mature: 34296
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLASLVLACLFGMPFAAHAASLTLYSRLDYAPAVARAFTAKTGIAVRVRRPPPTGLAD CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHH RIEREGAHPRWALAWFAGTPNAVALDARGLLARHLPVPAGLSPRAAALIPADGSAIPTGL HHHHCCCCCCEEEEEECCCCCEEEECCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCC ELGGVVLMSKSAPFTPPLHWHGLLAPARRGLTGMADPTTDDAAWGGLASLLATEGWPDGR CCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH RFVTALGGAGLHIYATTADTVAALRSGAIQLALVRSAVAFHVASRIDPSLEAVVPAPAVL HHHEEECCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHH MPSLIVMPRHMTPALRRAASAFIAFACSPAGQRAALASDDMDSAFWPVNATVPPPPGLPD HHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC LAALAPRDPAAVAANPLPAIAWFAREMVGPGL HHHCCCCCCCHHCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MRRLASLVLACLFGMPFAAHAASLTLYSRLDYAPAVARAFTAKTGIAVRVRRPPPTGLAD CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHH RIEREGAHPRWALAWFAGTPNAVALDARGLLARHLPVPAGLSPRAAALIPADGSAIPTGL HHHHCCCCCCEEEEEECCCCCEEEECCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCC ELGGVVLMSKSAPFTPPLHWHGLLAPARRGLTGMADPTTDDAAWGGLASLLATEGWPDGR CCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH RFVTALGGAGLHIYATTADTVAALRSGAIQLALVRSAVAFHVASRIDPSLEAVVPAPAVL HHHEEECCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHH MPSLIVMPRHMTPALRRAASAFIAFACSPAGQRAALASDDMDSAFWPVNATVPPPPGLPD HHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC LAALAPRDPAAVAANPLPAIAWFAREMVGPGL HHHCCCCCCCHHCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA