Click here to switch to the map view.

The map label for this gene is 148243432

Identifier: 148243432

GI number: 148243432

Start: 2029774

End: 2030247

Strand: Direct

Name: 148243432

Synonym: SynRCC307_2333

Alternate gene names: NA

Gene position: 2029774-2030247 (Clockwise)

Preceding gene: 148243431

Following gene: 148243435

Centisome position: 91.23

GC content: 65.82

Gene sequence:

>474_bases
ATGGACCCAGTGCCTGCCCCCCGCCATCGCTCCCGCTGGAGCTTGTTGAGCCTGCTGGTGTTGGCGGCCCCGCTGGCCAT
CCTCAATCCCAGCCTGGCGGATCCGCTCAAACAATTGGAGACAGGCTTTTGCTCGGGCTGCGCCCTCAGCGGCGCTGATC
TGCGCGGCCGTGATCTGCGCGGCTTCTACCTCATTGGCGCGGATCTCCGCGGCGCCGACCTGATCGGCGCGGATCTCAGC
GGCGCCAACCTGGAAGGCGCTGATCTCAGCGGCGCCAACTTGGAAGGAGCTCAGCTGCAGGGCAGCCGGCTCAGCAATGC
CGATCTGCGCGGCGCCAATCTGCGCTTCGCCGATCTCACCGATGCCATCGCCATCCAAGCGATCACCGAAGGAGCCCAAG
TCGAGGGACTGGAGTTCAGCGGCGCTGAGCTCTACCGCAGCAACCTGATCGTCGGCGGAGACGACAACCAGTAG

Upstream 100 bases:

>100_bases
AGCACTCCAAGACACAGCGGCGCGCTTGCCCTACATGCAGGGGTTCGTGGCCAGCCGCTGATTATTTGTCTACAAAAGAG
ATAGCGATGAGACGGATGCG

Downstream 100 bases:

>100_bases
GCGACCTACCAGGGTTGGTCCTCAGCCCCAGGTCCCTGCACGACACCAGTGCGGGCTTCATAGGGAACAAACGGCAGACC
TGGCCCTTGGAAACGGAAGT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MDPVPAPRHRSRWSLLSLLVLAAPLAILNPSLADPLKQLETGFCSGCALSGADLRGRDLRGFYLIGADLRGADLIGADLS
GANLEGADLSGANLEGAQLQGSRLSNADLRGANLRFADLTDAIAIQAITEGAQVEGLEFSGAELYRSNLIVGGDDNQ

Sequences:

>Translated_157_residues
MDPVPAPRHRSRWSLLSLLVLAAPLAILNPSLADPLKQLETGFCSGCALSGADLRGRDLRGFYLIGADLRGADLIGADLS
GANLEGADLSGANLEGAQLQGSRLSNADLRGANLRFADLTDAIAIQAITEGAQVEGLEFSGAELYRSNLIVGGDDNQ
>Mature_157_residues
MDPVPAPRHRSRWSLLSLLVLAAPLAILNPSLADPLKQLETGFCSGCALSGADLRGRDLRGFYLIGADLRGADLIGADLS
GANLEGADLSGANLEGAQLQGSRLSNADLRGANLRFADLTDAIAIQAITEGAQVEGLEFSGAELYRSNLIVGGDDNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=108, Percent_Identity=38.8888888888889, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 16344; Mature: 16344

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPVPAPRHRSRWSLLSLLVLAAPLAILNPSLADPLKQLETGFCSGCALSGADLRGRDLR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GFYLIGADLRGADLIGADLSGANLEGADLSGANLEGAQLQGSRLSNADLRGANLRFADLT
EEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEHHHH
DAIAIQAITEGAQVEGLEFSGAELYRSNLIVGGDDNQ
HHHHHHHHHCCCEECCEECCCHHHHHCCEEECCCCCC
>Mature Secondary Structure
MDPVPAPRHRSRWSLLSLLVLAAPLAILNPSLADPLKQLETGFCSGCALSGADLRGRDLR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GFYLIGADLRGADLIGADLSGANLEGADLSGANLEGAQLQGSRLSNADLRGANLRFADLT
EEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEHHHH
DAIAIQAITEGAQVEGLEFSGAELYRSNLIVGGDDNQ
HHHHHHHHHCCCEECCEECCCHHHHHCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]