| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148243255
Identifier: 148243255
GI number: 148243255
Start: 1857890
End: 1858159
Strand: Direct
Name: 148243255
Synonym: SynRCC307_2156
Alternate gene names: NA
Gene position: 1857890-1858159 (Clockwise)
Preceding gene: 148243254
Following gene: 148243258
Centisome position: 83.5
GC content: 58.89
Gene sequence:
>270_bases TTGGTTAAGAGCGGATTGCATGCCGGTTTGTCTAGTCAGGATTCTGAGGCGATATCCCATCGGTCTGCCGGCATGAAAGC CCTCACCGAAATACCACCCACTCTGAAGTTTGAAGAGTCGACCCTGCGGGCCGCAGCGGCGGTGTTGCATCGACGCCTAA TTGGCCAAGGCCTCAGCCCTCAAGCTGCCGCCGACATGCTGACCAGCGAACTGGCTGCCAATCTCCTTGCCGAGCACAGC AGCGATTTGGAGTGCCTTGCCGGCAGCTAG
Upstream 100 bases:
>100_bases GCTTTCAGTGGCCTACTGGCCTCAACAGCCTTGAGCCTGTTGGTCTTGCCTGTGGTTTACGAGATCGTCAAAACCTGGGA ACAGAAGCGGACACAAAAAC
Downstream 100 bases:
>100_bases CGCCCTGCCGCAAACCATCGAATCCAGCCCCCAATTGGGGGCTTTTTTCATGGGCCCAATCCAGTGATCCCGCCGCCATA AAAAAACCCCCGCCGAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MVKSGLHAGLSSQDSEAISHRSAGMKALTEIPPTLKFEESTLRAAAAVLHRRLIGQGLSPQAAADMLTSELAANLLAEHS SDLECLAGS
Sequences:
>Translated_89_residues MVKSGLHAGLSSQDSEAISHRSAGMKALTEIPPTLKFEESTLRAAAAVLHRRLIGQGLSPQAAADMLTSELAANLLAEHS SDLECLAGS >Mature_89_residues MVKSGLHAGLSSQDSEAISHRSAGMKALTEIPPTLKFEESTLRAAAAVLHRRLIGQGLSPQAAADMLTSELAANLLAEHS SDLECLAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9239; Mature: 9239
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSGLHAGLSSQDSEAISHRSAGMKALTEIPPTLKFEESTLRAAAAVLHRRLIGQGLSP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC QAAADMLTSELAANLLAEHSSDLECLAGS HHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVKSGLHAGLSSQDSEAISHRSAGMKALTEIPPTLKFEESTLRAAAAVLHRRLIGQGLSP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC QAAADMLTSELAANLLAEHSSDLECLAGS HHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA