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The map label for this gene is recF [H]

Identifier: 148243191

GI number: 148243191

Start: 1810684

End: 1811712

Strand: Direct

Name: recF [H]

Synonym: SynRCC307_2092

Alternate gene names: 148243191

Gene position: 1810684-1811712 (Clockwise)

Preceding gene: 148243190

Following gene: 148243193

Centisome position: 81.38

GC content: 64.24

Gene sequence:

>1029_bases
GTGCTCGGCAATAACGGCGAGGGCAAGTCCAACCTGCTGGAAGCTGTTGAGCTGCTGGCCAGCCTGCGCTCCCACCGCTG
CAGCCAAGATCGCGATCTGATCCAACGCGGGGAGACCAGCAGCAGGCTCAAAGCCTGGGTGGGAGAGGAAGCCACCGATG
AGTTGGCGATCGAACTCAGGCGCCAAGGGGGGCGCCGGGTTCAGCGCAACGGAAAGCTGCTGGAGCGCCACGCTGATCTG
ATTGGGCCGCTGCGCTGCGTTGGATTCAGTGCCCTCGATCTGAGCTTGGTGCGCGATGAACCAGCGGGCCGGCGCGATTG
GCTCGACCGCGTCGTGCAACAACTCGAACCCGTCTACGGCGAATTGCTGAGCCGCCACGGACGGCTCCTGCGGCAGCGCT
CACAACTGCTCAAACGCCAACTCAGCAACCGCGATGAGTTGTTGGATGCCTTTGACCACCAGTTGGCGGTGATCGGAACT
CGCCTGCATCGTCGCCGCCACCGCGCCCTCAAACGGCTGGAACCCTTGGCTGCCCCTTGGCAAGAACGGCTCAGTGGCGG
ACGCGAACAGCTGCAACTGCTCTACCAACCCGGCACCCAGCTCAACGGCGACGAAGACGAGCATGTGTGGCAGCAATGCC
TGCTGAATCAACTGCAAGAACAACGGCCGCAGGAGGCCCGTTTGGGGTATTGCAGCGTTGGGCCCCAACGGGATGACGTG
GCCCTGCTGCTCGGGGGGGAGCCGGCACGTCGGCTCGGCTCCGCAGGCCAGCAACGCTGCCTTGTGCTCGCGCTCAAGCT
GGCCGAACTGGAGCTGGTCACCAGCCTCAGTGGGGTGCCGCCCCTGCTACTGCTCGACGATGTCTTGGCCGAACTGGACC
CCCAACGGCAACAACTGCTGCTGGAGGCCGTTGGCGAAGGCCATCAATGTTTGGTGAGTGCCACGCACCTGCAAAGTTGC
GTAGCCGACTGGCAGCAACGGGCGCAGCTGGTGGAAGTCAGGGCTGGGGCTGTTCTTCCTGCGGCGTAA

Upstream 100 bases:

>100_bases
GCTGAGTGGCCCTGCCCCCATCCTTCTCCACCGCCTGGAGCTGAGCCGTTTTCGCAACTATGCGGAGCTGCATCTGGAGC
TGGATGCGCCGCGGCTGCTG

Downstream 100 bases:

>100_bases
GCACCGGAGCAGCCTGCTGCTCAGCTGGCGGCGAGGAGAAGCCAAGGAACGCCAACACCGTGCCGCCGACAGCCACGCCT
GCAACCAACAAAATCAACAG

Product: recombination protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLGNNGEGKSNLLEAVELLASLRSHRCSQDRDLIQRGETSSRLKAWVGEEATDELAIELRRQGGRRVQRNGKLLERHADL
IGPLRCVGFSALDLSLVRDEPAGRRDWLDRVVQQLEPVYGELLSRHGRLLRQRSQLLKRQLSNRDELLDAFDHQLAVIGT
RLHRRRHRALKRLEPLAAPWQERLSGGREQLQLLYQPGTQLNGDEDEHVWQQCLLNQLQEQRPQEARLGYCSVGPQRDDV
ALLLGGEPARRLGSAGQQRCLVLALKLAELELVTSLSGVPPLLLLDDVLAELDPQRQQLLLEAVGEGHQCLVSATHLQSC
VADWQQRAQLVEVRAGAVLPAA

Sequences:

>Translated_342_residues
MLGNNGEGKSNLLEAVELLASLRSHRCSQDRDLIQRGETSSRLKAWVGEEATDELAIELRRQGGRRVQRNGKLLERHADL
IGPLRCVGFSALDLSLVRDEPAGRRDWLDRVVQQLEPVYGELLSRHGRLLRQRSQLLKRQLSNRDELLDAFDHQLAVIGT
RLHRRRHRALKRLEPLAAPWQERLSGGREQLQLLYQPGTQLNGDEDEHVWQQCLLNQLQEQRPQEARLGYCSVGPQRDDV
ALLLGGEPARRLGSAGQQRCLVLALKLAELELVTSLSGVPPLLLLDDVLAELDPQRQQLLLEAVGEGHQCLVSATHLQSC
VADWQQRAQLVEVRAGAVLPAA
>Mature_342_residues
MLGNNGEGKSNLLEAVELLASLRSHRCSQDRDLIQRGETSSRLKAWVGEEATDELAIELRRQGGRRVQRNGKLLERHADL
IGPLRCVGFSALDLSLVRDEPAGRRDWLDRVVQQLEPVYGELLSRHGRLLRQRSQLLKRQLSNRDELLDAFDHQLAVIGT
RLHRRRHRALKRLEPLAAPWQERLSGGREQLQLLYQPGTQLNGDEDEHVWQQCLLNQLQEQRPQEARLGYCSVGPQRDDV
ALLLGGEPARRLGSAGQQRCLVLALKLAELELVTSLSGVPPLLLLDDVLAELDPQRQQLLLEAVGEGHQCLVSATHLQSC
VADWQQRAQLVEVRAGAVLPAA

Specific function: The recF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP [H]

COG id: COG1195

COG function: function code L; Recombinational DNA repair ATPase (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recF family [H]

Homologues:

Organism=Escherichia coli, GI1790135, Length=342, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001238
- InterPro:   IPR018078 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38379; Mature: 38379

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS00617 RECF_1 ; PS00618 RECF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGNNGEGKSNLLEAVELLASLRSHRCSQDRDLIQRGETSSRLKAWVGEEATDELAIELR
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
RQGGRRVQRNGKLLERHADLIGPLRCVGFSALDLSLVRDEPAGRRDWLDRVVQQLEPVYG
HHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ELLSRHGRLLRQRSQLLKRQLSNRDELLDAFDHQLAVIGTRLHRRRHRALKRLEPLAAPW
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QERLSGGREQLQLLYQPGTQLNGDEDEHVWQQCLLNQLQEQRPQEARLGYCSVGPQRDDV
HHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCE
ALLLGGEPARRLGSAGQQRCLVLALKLAELELVTSLSGVPPLLLLDDVLAELDPQRQQLL
EEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHH
LEAVGEGHQCLVSATHLQSCVADWQQRAQLVEVRAGAVLPAA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLGNNGEGKSNLLEAVELLASLRSHRCSQDRDLIQRGETSSRLKAWVGEEATDELAIELR
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
RQGGRRVQRNGKLLERHADLIGPLRCVGFSALDLSLVRDEPAGRRDWLDRVVQQLEPVYG
HHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ELLSRHGRLLRQRSQLLKRQLSNRDELLDAFDHQLAVIGTRLHRRRHRALKRLEPLAAPW
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QERLSGGREQLQLLYQPGTQLNGDEDEHVWQQCLLNQLQEQRPQEARLGYCSVGPQRDDV
HHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCE
ALLLGGEPARRLGSAGQQRCLVLALKLAELELVTSLSGVPPLLLLDDVLAELDPQRQQLL
EEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHH
LEAVGEGHQCLVSATHLQSCVADWQQRAQLVEVRAGAVLPAA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA