Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243181

Identifier: 148243181

GI number: 148243181

Start: 1798239

End: 1799093

Strand: Direct

Name: 148243181

Synonym: SynRCC307_2082

Alternate gene names: NA

Gene position: 1798239-1799093 (Clockwise)

Preceding gene: 148243180

Following gene: 148243183

Centisome position: 80.82

GC content: 62.69

Gene sequence:

>855_bases
TTGATTCCCATGGGTCGCATCGCTCTGCTCTTGGGCGGCTTTCTGTTGCTAGCCACCCCTGCCCAAGCAGGACTCATGGA
CTTGCTCGACAGCATCGAATCGCCCCTGCAAGAAAGCCCTGAGTTACCACCGTTGCCGGACGAACCCGGCAAAGGCAAAA
ACTGGATTGGCACGGAGATCCCCAAACCCGATCTACCGATCTTGGTGCTGGCAGGCCATGCCGATTCCCAGAGGATGGCT
GGCTCTGGCACCCCTGGACGCGCCGTTGGCATGCGCGGTGCCCGGCCCATGCAGCCCGGCATCACCGATGAGCTGTTCTG
GAACCTGCTCACCGCCAAAGCGGTTGTGGCCGAGGGCCAGCGGCAAGGGTTGAAGATGCGCTTCTACGACCCCGGCGTGC
GCACCATTCGCGATTCCGATGATCCACGCACCAACTGGAGCGTGGGTCGTGAGCATGTCTCAAACGGCGGATACGCCGTT
GAAATTCACTACGACGCCTACTCACCCCATGGCATCGGCCCCGGCATCATCCCGGCGGTGCTCTATGGCTTCTCGGTGAT
GGATGAAGCCCTAGCTGAGGAATTTGGCGCTTACCCCTATGACTACCGGGGCATGCTCGGAGGCCCCCGCCGCGGCGTGG
CGATGCTGGAAATTGGCCAGCTGGAAGGGGCGCTGGAAGCCGGGCTCCGCAATCCCTCCACGCGCCAACAATCGCTTCAA
ACCATTGCTCGCCGCGTGGTGCGAGCGCTCCGGCAGGGGATGGTCTTAGCCAACAGCCCCGTGGAGGGCACAACGCTGCT
CAAGGGCAGCATCACCGAGCCAGTCCTGGGGCCTCGTGAAGACGTCAGTGAGTAG

Upstream 100 bases:

>100_bases
CCCACTGAATCTCCACAGCGATGGCGAGTTACTGAGTTCCCCGGTTTAAGGCAATTGCCTTTGCAAATCAGATTTAACCG
GGCAGCATGGGGGACCCATT

Downstream 100 bases:

>100_bases
GGCCTCTCGGCTGCCCTCTTGAGCGGTGTAGCCATATTCCCAACGAACCAACGGTGGCAGCGACATCAGGATGGATTCAG
TGCGGCCATTGGTCTGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MIPMGRIALLLGGFLLLATPAQAGLMDLLDSIESPLQESPELPPLPDEPGKGKNWIGTEIPKPDLPILVLAGHADSQRMA
GSGTPGRAVGMRGARPMQPGITDELFWNLLTAKAVVAEGQRQGLKMRFYDPGVRTIRDSDDPRTNWSVGREHVSNGGYAV
EIHYDAYSPHGIGPGIIPAVLYGFSVMDEALAEEFGAYPYDYRGMLGGPRRGVAMLEIGQLEGALEAGLRNPSTRQQSLQ
TIARRVVRALRQGMVLANSPVEGTTLLKGSITEPVLGPREDVSE

Sequences:

>Translated_284_residues
MIPMGRIALLLGGFLLLATPAQAGLMDLLDSIESPLQESPELPPLPDEPGKGKNWIGTEIPKPDLPILVLAGHADSQRMA
GSGTPGRAVGMRGARPMQPGITDELFWNLLTAKAVVAEGQRQGLKMRFYDPGVRTIRDSDDPRTNWSVGREHVSNGGYAV
EIHYDAYSPHGIGPGIIPAVLYGFSVMDEALAEEFGAYPYDYRGMLGGPRRGVAMLEIGQLEGALEAGLRNPSTRQQSLQ
TIARRVVRALRQGMVLANSPVEGTTLLKGSITEPVLGPREDVSE
>Mature_284_residues
MIPMGRIALLLGGFLLLATPAQAGLMDLLDSIESPLQESPELPPLPDEPGKGKNWIGTEIPKPDLPILVLAGHADSQRMA
GSGTPGRAVGMRGARPMQPGITDELFWNLLTAKAVVAEGQRQGLKMRFYDPGVRTIRDSDDPRTNWSVGREHVSNGGYAV
EIHYDAYSPHGIGPGIIPAVLYGFSVMDEALAEEFGAYPYDYRGMLGGPRRGVAMLEIGQLEGALEAGLRNPSTRQQSLQ
TIARRVVRALRQGMVLANSPVEGTTLLKGSITEPVLGPREDVSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30528; Mature: 30528

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPMGRIALLLGGFLLLATPAQAGLMDLLDSIESPLQESPELPPLPDEPGKGKNWIGTEI
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PKPDLPILVLAGHADSQRMAGSGTPGRAVGMRGARPMQPGITDELFWNLLTAKAVVAEGQ
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RQGLKMRFYDPGVRTIRDSDDPRTNWSVGREHVSNGGYAVEIHYDAYSPHGIGPGIIPAV
HCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHH
LYGFSVMDEALAEEFGAYPYDYRGMLGGPRRGVAMLEIGQLEGALEAGLRNPSTRQQSLQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHH
TIARRVVRALRQGMVLANSPVEGTTLLKGSITEPVLGPREDVSE
HHHHHHHHHHHCCEEEECCCCCCCEEECCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MIPMGRIALLLGGFLLLATPAQAGLMDLLDSIESPLQESPELPPLPDEPGKGKNWIGTEI
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PKPDLPILVLAGHADSQRMAGSGTPGRAVGMRGARPMQPGITDELFWNLLTAKAVVAEGQ
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RQGLKMRFYDPGVRTIRDSDDPRTNWSVGREHVSNGGYAVEIHYDAYSPHGIGPGIIPAV
HCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHH
LYGFSVMDEALAEEFGAYPYDYRGMLGGPRRGVAMLEIGQLEGALEAGLRNPSTRQQSLQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHH
TIARRVVRALRQGMVLANSPVEGTTLLKGSITEPVLGPREDVSE
HHHHHHHHHHHCCEEEECCCCCCCEEECCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA