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The map label for this gene is cpcS [H]

Identifier: 148243159

GI number: 148243159

Start: 1783012

End: 1783620

Strand: Direct

Name: cpcS [H]

Synonym: SynRCC307_2060

Alternate gene names: 148243159

Gene position: 1783012-1783620 (Clockwise)

Preceding gene: 148243158

Following gene: 148243160

Centisome position: 80.14

GC content: 50.9

Gene sequence:

>609_bases
ATGCGATCAGCTGAAATCCCACCAATGAATATGGCTGACTTTTTCAACAAAAGTCGGGGCCTGTGGCTGAACAGGCGGGT
CGTTCATCATATGGATTATCAAGATGACGAATCAGCAGATTCCAACCTAGTTATCGAACCTTTTGATAGCTCTGACCCTG
CAGTGGCAAAGGTTTGCGCAAGCCTGCAGGTTGATCTCAATCGAGCCACAGGTGGAGCCAGATTTTGGTGGGAAAGCAAC
CTTCAGGCGTTGGAACGCAATGAGGATTACGCAGCTGTTGTCGTTGATGCACCCAATCAACACAACCCTCGAACTGGGTT
TTTATTGAGAGATGTGGGCTATGTAGAAAAAAAACCAGTCCTTAGCACTTACAACTTTGCTGATGATGGCGTTCTAACGA
TCACAACCCGCTACGACACCAACGTGGGGATTGAACGCTGCTGGTTTGTGACCGATCAGGTGCGGATGCGGGTGAGCTCG
GTTCAATTCCTCAATGGCGTGGCCATGACCACCTATTGCACCGAGTTCCGTTGCCCCGACCCTGGCGCGATCAAAAACCT
TGCCGCAGTAGCCAAAGGACATACTGCTGGCTCCAGCGAGGAGGCTTGA

Upstream 100 bases:

>100_bases
TGAGTTAACACGTATCGACGAGGTACTCAACCAACTAATTCAACAGCGTGACTCCCAGGCAGCTCGCCAATAAATACTCT
TCAAAAGGCCTGGCAATTTA

Downstream 100 bases:

>100_bases
ACCATGTTTGATTCCTTCCTCGACGAACTCCACGACAGCATTCGCGCCCGCGGCGGCCAACCCACGGCCGTCCCTGCTGG
GCTTGAAGAATGCCAATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF200 [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRSAEIPPMNMADFFNKSRGLWLNRRVVHHMDYQDDESADSNLVIEPFDSSDPAVAKVCASLQVDLNRATGGARFWWESN
LQALERNEDYAAVVVDAPNQHNPRTGFLLRDVGYVEKKPVLSTYNFADDGVLTITTRYDTNVGIERCWFVTDQVRMRVSS
VQFLNGVAMTTYCTEFRCPDPGAIKNLAAVAKGHTAGSSEEA

Sequences:

>Translated_202_residues
MRSAEIPPMNMADFFNKSRGLWLNRRVVHHMDYQDDESADSNLVIEPFDSSDPAVAKVCASLQVDLNRATGGARFWWESN
LQALERNEDYAAVVVDAPNQHNPRTGFLLRDVGYVEKKPVLSTYNFADDGVLTITTRYDTNVGIERCWFVTDQVRMRVSS
VQFLNGVAMTTYCTEFRCPDPGAIKNLAAVAKGHTAGSSEEA
>Mature_202_residues
MRSAEIPPMNMADFFNKSRGLWLNRRVVHHMDYQDDESADSNLVIEPFDSSDPAVAKVCASLQVDLNRATGGARFWWESN
LQALERNEDYAAVVVDAPNQHNPRTGFLLRDVGYVEKKPVLSTYNFADDGVLTITTRYDTNVGIERCWFVTDQVRMRVSS
VQFLNGVAMTTYCTEFRCPDPGAIKNLAAVAKGHTAGSSEEA

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR018536 [H]

Pfam domain/function: PF09367 CpeS [H]

EC number: NA

Molecular weight: Translated: 22572; Mature: 22572

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSAEIPPMNMADFFNKSRGLWLNRRVVHHMDYQDDESADSNLVIEPFDSSDPAVAKVCA
CCCCCCCCCCHHHHHCCCCCEEEECHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHH
SLQVDLNRATGGARFWWESNLQALERNEDYAAVVVDAPNQHNPRTGFLLRDVGYVEKKPV
HHEEEEECCCCCEEEEECCCCHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCC
LSTYNFADDGVLTITTRYDTNVGIERCWFVTDQVRMRVSSVQFLNGVAMTTYCTEFRCPD
EEECCCCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHCCEEEEEEEEECCCCC
PGAIKNLAAVAKGHTAGSSEEA
CHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRSAEIPPMNMADFFNKSRGLWLNRRVVHHMDYQDDESADSNLVIEPFDSSDPAVAKVCA
CCCCCCCCCCHHHHHCCCCCEEEECHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHH
SLQVDLNRATGGARFWWESNLQALERNEDYAAVVVDAPNQHNPRTGFLLRDVGYVEKKPV
HHEEEEECCCCCEEEEECCCCHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCC
LSTYNFADDGVLTITTRYDTNVGIERCWFVTDQVRMRVSSVQFLNGVAMTTYCTEFRCPD
EEECCCCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHCCEEEEEEEEECCCCC
PGAIKNLAAVAKGHTAGSSEEA
CHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8425055; 8419325 [H]