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The map label for this gene is cpcT [H]

Identifier: 148243132

GI number: 148243132

Start: 1763308

End: 1763913

Strand: Direct

Name: cpcT [H]

Synonym: SynRCC307_2033

Alternate gene names: 148243132

Gene position: 1763308-1763913 (Clockwise)

Preceding gene: 148243128

Following gene: 148243133

Centisome position: 79.25

GC content: 56.6

Gene sequence:

>606_bases
ATGACCAACAGCTTGGATCGTCTGACCCGCTGGTTATGCGGGAGCTTCAGCAACCAGCAACAAGCGTTTGAAAACCCTCC
TCTGTATGGGCACATCCATGTGCGCTACAGGCCCTTGGGGCAGCTCGCGCCACGCTCAATGTTGATTGAACAGGCCTACG
CCATTACTCCCAAAGAGCCCTATCGCATTCGTGTGGTGAGGCCTTTGCTCTGCCCTGAGCAAGGGCTCAAAGTCATGAAC
TACACCCTGGCTGAGCCACAACGTTTTATTGGCGCCATCGACGATGCCGACCTGCGCGCCGAAATTCGTGAAGACGATCT
CACTCACCTCGAGGGATGCAACTACCTGGTGCGCGATCAGGGCGACCATTTCAGCGGCAGCGTCGAGCCGGGATGCCGCT
GCAAGGTTCGTCGTAAGGGCCGTGATTCCTACTTGGTCAGTGAGTTTGTTCTGAGGAACGGCACCATGGAGACGATTGAC
CGCGGCCACGACCCTGACACCCATGAACAGTTGTGGGGGTCTCTACCCGGTCCGTTTCTGTTTGAGCGCAAAGAAGACTG
GTCTGATGAACTTCTTCCGCTATGGGGTGGACTGATGCAGGGATAG

Upstream 100 bases:

>100_bases
CCGGCAAGCCCCAAAGGAAGGACGTGCCGATCGTATCGATGCTGTTTGGCCTGTCCATCCCCCCCCAGCCGTGGCAGCAT
CGCCGTGGTTTGAACGGGTC

Downstream 100 bases:

>100_bases
CGGCCATAAAGTCTTGACTCTTGGGCTCATCCCATGCCGCCAGCCCTGGAAACTGAGCTCAAAGATCTGCTGACCAGGGC
AGGCCAGCAGCGCGAAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTNSLDRLTRWLCGSFSNQQQAFENPPLYGHIHVRYRPLGQLAPRSMLIEQAYAITPKEPYRIRVVRPLLCPEQGLKVMN
YTLAEPQRFIGAIDDADLRAEIREDDLTHLEGCNYLVRDQGDHFSGSVEPGCRCKVRRKGRDSYLVSEFVLRNGTMETID
RGHDPDTHEQLWGSLPGPFLFERKEDWSDELLPLWGGLMQG

Sequences:

>Translated_201_residues
MTNSLDRLTRWLCGSFSNQQQAFENPPLYGHIHVRYRPLGQLAPRSMLIEQAYAITPKEPYRIRVVRPLLCPEQGLKVMN
YTLAEPQRFIGAIDDADLRAEIREDDLTHLEGCNYLVRDQGDHFSGSVEPGCRCKVRRKGRDSYLVSEFVLRNGTMETID
RGHDPDTHEQLWGSLPGPFLFERKEDWSDELLPLWGGLMQG
>Mature_200_residues
TNSLDRLTRWLCGSFSNQQQAFENPPLYGHIHVRYRPLGQLAPRSMLIEQAYAITPKEPYRIRVVRPLLCPEQGLKVMNY
TLAEPQRFIGAIDDADLRAEIREDDLTHLEGCNYLVRDQGDHFSGSVEPGCRCKVRRKGRDSYLVSEFVLRNGTMETIDR
GHDPDTHEQLWGSLPGPFLFERKEDWSDELLPLWGGLMQG

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcT/CpeT biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010404 [H]

Pfam domain/function: PF06206 DUF1001 [H]

EC number: NA

Molecular weight: Translated: 23144; Mature: 23012

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSLDRLTRWLCGSFSNQQQAFENPPLYGHIHVRYRPLGQLAPRSMLIEQAYAITPKEP
CCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEEEECCCHHCHHHHHHHHHHCCCCCCC
YRIRVVRPLLCPEQGLKVMNYTLAEPQRFIGAIDDADLRAEIREDDLTHLEGCNYLVRDQ
EEEEEECCHHCCHHCCHHHHHHHCCHHHHHCCCCCCHHHHHHCCCCHHHHHCCCEEEECC
GDHFSGSVEPGCRCKVRRKGRDSYLVSEFVLRNGTMETIDRGHDPDTHEQLWGSLPGPFL
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCEE
FERKEDWSDELLPLWGGLMQG
ECCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TNSLDRLTRWLCGSFSNQQQAFENPPLYGHIHVRYRPLGQLAPRSMLIEQAYAITPKEP
CCHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEEEECCCHHCHHHHHHHHHHCCCCCCC
YRIRVVRPLLCPEQGLKVMNYTLAEPQRFIGAIDDADLRAEIREDDLTHLEGCNYLVRDQ
EEEEEECCHHCCHHCCHHHHHHHCCHHHHHCCCCCCHHHHHHCCCCHHHHHCCCEEEECC
GDHFSGSVEPGCRCKVRRKGRDSYLVSEFVLRNGTMETIDRGHDPDTHEQLWGSLPGPFL
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCEE
FERKEDWSDELLPLWGGLMQG
ECCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8425055 [H]