| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243071
Identifier: 148243071
GI number: 148243071
Start: 1718035
End: 1718541
Strand: Direct
Name: 148243071
Synonym: SynRCC307_1972
Alternate gene names: NA
Gene position: 1718035-1718541 (Clockwise)
Preceding gene: 148243069
Following gene: 148243072
Centisome position: 77.22
GC content: 62.33
Gene sequence:
>507_bases GTGGCCGCGACGAAGACCAAAACCGCCAAGTGGATCACCAAGGTCAGGGCCGTATGCCCCACCGGCTGGAGCGCCACCGA ATCCCGAACGCGGGCCCGAATCCAAGTCCGCAAAAAGGGCCAGCGCGCCGCCGGCGTAACGCTCGAGCTGCCATGGGCGG CTGACGCCAAGGATGAAATCCAAGAACGCATCGTGGCCCTCAAGGGGCTGGTTGCCGGTGGTGTTGATCTGCAGGACGCA GCCAAGCGGCTATCGCGCCAGCCCAACGTCACCAGGGCCAGCGGCGCCAACTACGCCCTGTGGCACGAAATCATTGAGAG TTACATAGAAGACTTCAACCGCGACAAAAAGGTTTCCGAGACCACCTGGCAGAACGATTACGAGAAGTTCTTGGACCGGG TGCTGGTGGTGATGAGCAAGGCCAACGCTCCTGTGAACGCCAAAGAGCTGGTGGCCGAAGCGCTGCAGCCCCGAAGAGCG GGCCAAGGTGCATCTGGCGCTCCGTGA
Upstream 100 bases:
>100_bases ACGAACAAAAAGAGCCACAAGGCTTGTTTGTTACTAACTGCCCGATCGTGTGCAAAGCGTGTGCAAGGTGGTATGTCTGG GACAGAGACAAGAGGGCCCC
Downstream 100 bases:
>100_bases AGAGTTCGCCAGCGAGGAAACCAACGGCCTAGTGCTGGGCAGCTGCGAGGTGCTGCATGACGCCGCCGAAGACGTGGCTT GCAACCTGCTGAATGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MAATKTKTAKWITKVRAVCPTGWSATESRTRARIQVRKKGQRAAGVTLELPWAADAKDEIQERIVALKGLVAGGVDLQDA AKRLSRQPNVTRASGANYALWHEIIESYIEDFNRDKKVSETTWQNDYEKFLDRVLVVMSKANAPVNAKELVAEALQPRRA GQGASGAP
Sequences:
>Translated_168_residues MAATKTKTAKWITKVRAVCPTGWSATESRTRARIQVRKKGQRAAGVTLELPWAADAKDEIQERIVALKGLVAGGVDLQDA AKRLSRQPNVTRASGANYALWHEIIESYIEDFNRDKKVSETTWQNDYEKFLDRVLVVMSKANAPVNAKELVAEALQPRRA GQGASGAP >Mature_167_residues AATKTKTAKWITKVRAVCPTGWSATESRTRARIQVRKKGQRAAGVTLELPWAADAKDEIQERIVALKGLVAGGVDLQDAA KRLSRQPNVTRASGANYALWHEIIESYIEDFNRDKKVSETTWQNDYEKFLDRVLVVMSKANAPVNAKELVAEALQPRRAG QGASGAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18502; Mature: 18371
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATKTKTAKWITKVRAVCPTGWSATESRTRARIQVRKKGQRAAGVTLELPWAADAKDEI CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHH QERIVALKGLVAGGVDLQDAAKRLSRQPNVTRASGANYALWHEIIESYIEDFNRDKKVSE HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH TTWQNDYEKFLDRVLVVMSKANAPVNAKELVAEALQPRRAGQGASGAP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AATKTKTAKWITKVRAVCPTGWSATESRTRARIQVRKKGQRAAGVTLELPWAADAKDEI CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHH QERIVALKGLVAGGVDLQDAAKRLSRQPNVTRASGANYALWHEIIESYIEDFNRDKKVSE HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH TTWQNDYEKFLDRVLVVMSKANAPVNAKELVAEALQPRRAGQGASGAP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA