Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243071

Identifier: 148243071

GI number: 148243071

Start: 1718035

End: 1718541

Strand: Direct

Name: 148243071

Synonym: SynRCC307_1972

Alternate gene names: NA

Gene position: 1718035-1718541 (Clockwise)

Preceding gene: 148243069

Following gene: 148243072

Centisome position: 77.22

GC content: 62.33

Gene sequence:

>507_bases
GTGGCCGCGACGAAGACCAAAACCGCCAAGTGGATCACCAAGGTCAGGGCCGTATGCCCCACCGGCTGGAGCGCCACCGA
ATCCCGAACGCGGGCCCGAATCCAAGTCCGCAAAAAGGGCCAGCGCGCCGCCGGCGTAACGCTCGAGCTGCCATGGGCGG
CTGACGCCAAGGATGAAATCCAAGAACGCATCGTGGCCCTCAAGGGGCTGGTTGCCGGTGGTGTTGATCTGCAGGACGCA
GCCAAGCGGCTATCGCGCCAGCCCAACGTCACCAGGGCCAGCGGCGCCAACTACGCCCTGTGGCACGAAATCATTGAGAG
TTACATAGAAGACTTCAACCGCGACAAAAAGGTTTCCGAGACCACCTGGCAGAACGATTACGAGAAGTTCTTGGACCGGG
TGCTGGTGGTGATGAGCAAGGCCAACGCTCCTGTGAACGCCAAAGAGCTGGTGGCCGAAGCGCTGCAGCCCCGAAGAGCG
GGCCAAGGTGCATCTGGCGCTCCGTGA

Upstream 100 bases:

>100_bases
ACGAACAAAAAGAGCCACAAGGCTTGTTTGTTACTAACTGCCCGATCGTGTGCAAAGCGTGTGCAAGGTGGTATGTCTGG
GACAGAGACAAGAGGGCCCC

Downstream 100 bases:

>100_bases
AGAGTTCGCCAGCGAGGAAACCAACGGCCTAGTGCTGGGCAGCTGCGAGGTGCTGCATGACGCCGCCGAAGACGTGGCTT
GCAACCTGCTGAATGGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MAATKTKTAKWITKVRAVCPTGWSATESRTRARIQVRKKGQRAAGVTLELPWAADAKDEIQERIVALKGLVAGGVDLQDA
AKRLSRQPNVTRASGANYALWHEIIESYIEDFNRDKKVSETTWQNDYEKFLDRVLVVMSKANAPVNAKELVAEALQPRRA
GQGASGAP

Sequences:

>Translated_168_residues
MAATKTKTAKWITKVRAVCPTGWSATESRTRARIQVRKKGQRAAGVTLELPWAADAKDEIQERIVALKGLVAGGVDLQDA
AKRLSRQPNVTRASGANYALWHEIIESYIEDFNRDKKVSETTWQNDYEKFLDRVLVVMSKANAPVNAKELVAEALQPRRA
GQGASGAP
>Mature_167_residues
AATKTKTAKWITKVRAVCPTGWSATESRTRARIQVRKKGQRAAGVTLELPWAADAKDEIQERIVALKGLVAGGVDLQDAA
KRLSRQPNVTRASGANYALWHEIIESYIEDFNRDKKVSETTWQNDYEKFLDRVLVVMSKANAPVNAKELVAEALQPRRAG
QGASGAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18502; Mature: 18371

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATKTKTAKWITKVRAVCPTGWSATESRTRARIQVRKKGQRAAGVTLELPWAADAKDEI
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHH
QERIVALKGLVAGGVDLQDAAKRLSRQPNVTRASGANYALWHEIIESYIEDFNRDKKVSE
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
TTWQNDYEKFLDRVLVVMSKANAPVNAKELVAEALQPRRAGQGASGAP
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AATKTKTAKWITKVRAVCPTGWSATESRTRARIQVRKKGQRAAGVTLELPWAADAKDEI
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHH
QERIVALKGLVAGGVDLQDAAKRLSRQPNVTRASGANYALWHEIIESYIEDFNRDKKVSE
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
TTWQNDYEKFLDRVLVVMSKANAPVNAKELVAEALQPRRAGQGASGAP
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA