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The map label for this gene is ccdA

Identifier: 148242991

GI number: 148242991

Start: 1648312

End: 1649028

Strand: Direct

Name: ccdA

Synonym: SynRCC307_1892

Alternate gene names: NA

Gene position: 1648312-1649028 (Clockwise)

Preceding gene: 148242990

Following gene: 148242992

Centisome position: 74.08

GC content: 65.55

Gene sequence:

>717_bases
TTGGTGAGCCTTTCTTTTTCGCTTGCCGACCTGGCCCAAGCCAGCGAACAGCTGCTTCGCAGCGGCTTGGAACATCCCAC
GCCCCTCACCTTGGTGCTGGTGTTCGCCGGCGGCTTGCTCACCAGCCTTGGTCCCTGCAGTTTGTCGCTGCTGCCGGTGA
GCGTGGCCTACCTGGCCGGTTTTGGAGAGGGCCCAGCCTGGCAGCGGAGCGCAGGCTTTTGCTCAGGGGTGGTGGGGGCC
CTGGTGATCTTGGGCACCGCCAGCGCCATGCTCGGCCGCCTCTACGGGCAAACACCCGAAGCGATTTCCGTGGCGGTCGC
CATCTTGGCGGTGCTGATGGGGCTGAATTTGCTTGGGCTCCTGCCCTTACGGCTGCCTTCCGGGCCCGACCCTGAGCGCT
GGCGCCGGTTTGCACCAGCTGGCTTCGGTCCACCGGCCGCTGGTTTGGCCTTTGGCCTGGCGGCCTCCCCTTGCACCACT
CCGGTGCTTGCTGTGCTGTTGGCGTGGATTTCGCAAAGCGGCAAACCTTTGGTGGGCATGGTGTTGCTCAGCTGCTTTGG
GGCCGGGCAGGTGTTGCCCCTGCTGCTGGCCGGCAGCCTGGCGGCTTCGATTCCCAAGCTGCTGGCGCTGCGCGCAGTGA
GCCAATGGATTCCTCCGATTAGCGGCGCTGTTTTGGTGGTCATCGGCGGCCTCAGCCTGGTCTCGCGCCTGACATGA

Upstream 100 bases:

>100_bases
CCTTTGGTTGCCCGAGGGGTATGAGCGTCAGCAACCGATTCCCGTTGAGGCCTATCTGCAGCAAGCCCCGTGGAGTGCCC
CTCCTGCTCGATAGGGTGCT

Downstream 100 bases:

>100_bases
AGAGCCTGGTTCTCAAGGCTGCGGCCTGGTTGTCCGACCTGCGCGTCGCCATCGTGCTGCTGCTGTTGATTGCAGCCTGC
AGCGGTCTGGGAACGGCGAT

Product: cytochrome c biogenesis protein

Products: NA

Alternate protein names: Cytochrome C Biogenesis Protein; Cytochrome C Biogenesis Protein Transmembrane Region; Cytochrome C Biogenesis Protein-Like; CytoChrome C Biogenesis Protein; C-Type Cytochrome Biogenesis; C-Type Cytochrome Biogenesis Protein; ThiolDisulfide Interchange Protein DsbD

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MVSLSFSLADLAQASEQLLRSGLEHPTPLTLVLVFAGGLLTSLGPCSLSLLPVSVAYLAGFGEGPAWQRSAGFCSGVVGA
LVILGTASAMLGRLYGQTPEAISVAVAILAVLMGLNLLGLLPLRLPSGPDPERWRRFAPAGFGPPAAGLAFGLAASPCTT
PVLAVLLAWISQSGKPLVGMVLLSCFGAGQVLPLLLAGSLAASIPKLLALRAVSQWIPPISGAVLVVIGGLSLVSRLT

Sequences:

>Translated_238_residues
MVSLSFSLADLAQASEQLLRSGLEHPTPLTLVLVFAGGLLTSLGPCSLSLLPVSVAYLAGFGEGPAWQRSAGFCSGVVGA
LVILGTASAMLGRLYGQTPEAISVAVAILAVLMGLNLLGLLPLRLPSGPDPERWRRFAPAGFGPPAAGLAFGLAASPCTT
PVLAVLLAWISQSGKPLVGMVLLSCFGAGQVLPLLLAGSLAASIPKLLALRAVSQWIPPISGAVLVVIGGLSLVSRLT
>Mature_238_residues
MVSLSFSLADLAQASEQLLRSGLEHPTPLTLVLVFAGGLLTSLGPCSLSLLPVSVAYLAGFGEGPAWQRSAGFCSGVVGA
LVILGTASAMLGRLYGQTPEAISVAVAILAVLMGLNLLGLLPLRLPSGPDPERWRRFAPAGFGPPAAGLAFGLAASPCTT
PVLAVLLAWISQSGKPLVGMVLLSCFGAGQVLPLLLAGSLAASIPKLLALRAVSQWIPPISGAVLVVIGGLSLVSRLT

Specific function: Unknown

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24064; Mature: 24064

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLSFSLADLAQASEQLLRSGLEHPTPLTLVLVFAGGLLTSLGPCSLSLLPVSVAYLAG
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
FGEGPAWQRSAGFCSGVVGALVILGTASAMLGRLYGQTPEAISVAVAILAVLMGLNLLGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LPLRLPSGPDPERWRRFAPAGFGPPAAGLAFGLAASPCTTPVLAVLLAWISQSGKPLVGM
HHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH
VLLSCFGAGQVLPLLLAGSLAASIPKLLALRAVSQWIPPISGAVLVVIGGLSLVSRLT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSLSFSLADLAQASEQLLRSGLEHPTPLTLVLVFAGGLLTSLGPCSLSLLPVSVAYLAG
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
FGEGPAWQRSAGFCSGVVGALVILGTASAMLGRLYGQTPEAISVAVAILAVLMGLNLLGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LPLRLPSGPDPERWRRFAPAGFGPPAAGLAFGLAASPCTTPVLAVLLAWISQSGKPLVGM
HHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH
VLLSCFGAGQVLPLLLAGSLAASIPKLLALRAVSQWIPPISGAVLVVIGGLSLVSRLT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA