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The map label for this gene is yfjD [C]

Identifier: 148242966

GI number: 148242966

Start: 1626104

End: 1627132

Strand: Direct

Name: yfjD [C]

Synonym: SynRCC307_1867

Alternate gene names: 148242966

Gene position: 1626104-1627132 (Clockwise)

Preceding gene: 148242964

Following gene: 148242967

Centisome position: 73.09

GC content: 62.97

Gene sequence:

>1029_bases
GTGTGTCAGGTTGGCCCGCCGCCGGGTGCAGTGAGCGATTTCCTCCTTTTAGCGGGCCTGGTGCTCATCCTGCTGGCGGG
TTCAGCCCTGTGTTCTGGCGTGGAAGCCGCCCTGCTGACGGTGAGCCCCCTGCGGGTGCACGAGATGGTGGGGCGCGGGG
TTAAAGGGGCCCAACTGCTGCAAAACCTCAAGGGCCGCTTGGCCCGGGTCTTGGTGATGTTGGTGATCACCAACAACCTC
TTCAACATCTTCGGCAGCTTGATGTTGGGCGCCCTGGCCGCTGTTGTGTTCCATCACCACGGCCTGCAGGGAACCGCCCT
GACGGTGTTCTCGTTCAGCTTCACCGTGCTGGTGATCGTTTTGGGCGAAATCGTCCCGAAGGCCTTTGGAACCCGCACCG
CAGCCAGCACTGCCTTGCTCGCCGCACCAGCCCTGGCGCTGCTGCTGAAGCTGGGCATGCCACTGGTGCTGCTGCTTGAA
CGGTTGATGCCAGCGCTGAGTGAGGAAAACGAGCTCACCACCGATGAAAGCGAAATTCGCTTGCTGGCCAGGCTGGGATC
GCAAAAGGGACGCATTGAGGCCGATGAAGCCGCGATGATCGCCAAGGTGTTTCAACTCAATGACCTCACGGCCAGAGATT
TGATGCTGCCGCGGGTCTCCGCCCCCACGCTCAATGGTTCAACGCGGCTCGACGAGCTGCGCGATTTGCTCCTCACGGAC
GACTCCCCCTGGTGGGTGGTGCTGGGCGCTGAGGTGGATGAAGTGCTGGGGGTGGCCAGCCGCGATCAATTGCTCACCGC
TCTGGTGCAAGGCCGCGGACACGCCACCGCCGCCAGCGTTTCCGAGCCGGTGGAATTCGTGCCTGAGATGATCCGCGCTG
ATCGGCTGCTCACCAGTTTTCGCCGCAGCCGCGATTCGGTGCGTGTGGTGGTCGATGAATTTGGCGCTTTTGTTGGCCTT
ATCGGCGCTGAAGTCGTTCTGGCCGTTTTGGCGGGCTGGACCCGCCCCCGGGTGGAGCCGCAAGCCTGA

Upstream 100 bases:

>100_bases
CAGCGGCCTGCCCCTCGAGTGCATCAAGGAATTGCTGGCGCCGTTGGGCGTAATTGATCGGCACGGGGTCTGTCGGGCCT
TGGTGCAGGCGGTTAAATGA

Downstream 100 bases:

>100_bases
TGGACAAGCAGCGCAGCGCCACCATCACCCGTGCCCTGATCCAATGGCGGGAAGGATTGCAGCTCAGCCGCCGCGAGCAA
TCGGTGCTGGGACCGGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MCQVGPPPGAVSDFLLLAGLVLILLAGSALCSGVEAALLTVSPLRVHEMVGRGVKGAQLLQNLKGRLARVLVMLVITNNL
FNIFGSLMLGALAAVVFHHHGLQGTALTVFSFSFTVLVIVLGEIVPKAFGTRTAASTALLAAPALALLLKLGMPLVLLLE
RLMPALSEENELTTDESEIRLLARLGSQKGRIEADEAAMIAKVFQLNDLTARDLMLPRVSAPTLNGSTRLDELRDLLLTD
DSPWWVVLGAEVDEVLGVASRDQLLTALVQGRGHATAASVSEPVEFVPEMIRADRLLTSFRRSRDSVRVVVDEFGAFVGL
IGAEVVLAVLAGWTRPRVEPQA

Sequences:

>Translated_342_residues
MCQVGPPPGAVSDFLLLAGLVLILLAGSALCSGVEAALLTVSPLRVHEMVGRGVKGAQLLQNLKGRLARVLVMLVITNNL
FNIFGSLMLGALAAVVFHHHGLQGTALTVFSFSFTVLVIVLGEIVPKAFGTRTAASTALLAAPALALLLKLGMPLVLLLE
RLMPALSEENELTTDESEIRLLARLGSQKGRIEADEAAMIAKVFQLNDLTARDLMLPRVSAPTLNGSTRLDELRDLLLTD
DSPWWVVLGAEVDEVLGVASRDQLLTALVQGRGHATAASVSEPVEFVPEMIRADRLLTSFRRSRDSVRVVVDEFGAFVGL
IGAEVVLAVLAGWTRPRVEPQA
>Mature_342_residues
MCQVGPPPGAVSDFLLLAGLVLILLAGSALCSGVEAALLTVSPLRVHEMVGRGVKGAQLLQNLKGRLARVLVMLVITNNL
FNIFGSLMLGALAAVVFHHHGLQGTALTVFSFSFTVLVIVLGEIVPKAFGTRTAASTALLAAPALALLLKLGMPLVLLLE
RLMPALSEENELTTDESEIRLLARLGSQKGRIEADEAAMIAKVFQLNDLTARDLMLPRVSAPTLNGSTRLDELRDLLLTD
DSPWWVVLGAEVDEVLGVASRDQLLTALVQGRGHATAASVSEPVEFVPEMIRADRLLTSFRRSRDSVRVVVDEFGAFVGL
IGAEVVLAVLAGWTRPRVEPQA

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=324, Percent_Identity=22.5308641975309, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI145693175, Length=329, Percent_Identity=27.355623100304, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786879, Length=159, Percent_Identity=30.8176100628931, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 36485; Mature: 36485

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQVGPPPGAVSDFLLLAGLVLILLAGSALCSGVEAALLTVSPLRVHEMVGRGVKGAQLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH
QNLKGRLARVLVMLVITNNLFNIFGSLMLGALAAVVFHHHGLQGTALTVFSFSFTVLVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LGEIVPKAFGTRTAASTALLAAPALALLLKLGMPLVLLLERLMPALSEENELTTDESEIR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
LLARLGSQKGRIEADEAAMIAKVFQLNDLTARDLMLPRVSAPTLNGSTRLDELRDLLLTD
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
DSPWWVVLGAEVDEVLGVASRDQLLTALVQGRGHATAASVSEPVEFVPEMIRADRLLTSF
CCCEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RRSRDSVRVVVDEFGAFVGLIGAEVVLAVLAGWTRPRVEPQA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MCQVGPPPGAVSDFLLLAGLVLILLAGSALCSGVEAALLTVSPLRVHEMVGRGVKGAQLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH
QNLKGRLARVLVMLVITNNLFNIFGSLMLGALAAVVFHHHGLQGTALTVFSFSFTVLVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LGEIVPKAFGTRTAASTALLAAPALALLLKLGMPLVLLLERLMPALSEENELTTDESEIR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
LLARLGSQKGRIEADEAAMIAKVFQLNDLTARDLMLPRVSAPTLNGSTRLDELRDLLLTD
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
DSPWWVVLGAEVDEVLGVASRDQLLTALVQGRGHATAASVSEPVEFVPEMIRADRLLTSF
CCCEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RRSRDSVRVVVDEFGAFVGLIGAEVVLAVLAGWTRPRVEPQA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]