| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242780
Identifier: 148242780
GI number: 148242780
Start: 1469835
End: 1470281
Strand: Direct
Name: 148242780
Synonym: SynRCC307_1681
Alternate gene names: NA
Gene position: 1469835-1470281 (Clockwise)
Preceding gene: 148242777
Following gene: 148242781
Centisome position: 66.06
GC content: 64.88
Gene sequence:
>447_bases ATGAAAGTGCGGAACGAAACAGGCCCCCGGAGCCAGCCGCGAACACGTCACTTCGAACTCCGCTGCCGGGCAGTGGAGTT TTTTTTTGGCCAAGCCCAGGAAAGACCCAGTACGCTCCCGTCCATGGCGTTCACCCTTCCACTGATCGCAGCCCTACTGG GCGGAAGCCTGGTCAGCCAGGTGCCCTTGCAGGTGCAGCCTTACCGCGGCGGCAGCGAGGAGGAGAGCAGCGCGGAAGAG CCGCGCCCTGAAGCCGAGAACGACAGCGTCGACAACGACTGGCTGCGCGTACCGAGTGACGAGCCCGAGGAGAGGGCCTC GGAGCTCCAAGCCCCGCCGCTAACCCCGCCACCGGCCTTCAACAAACGCCGGTTCAAGAAACCCACGGTGCGCCCAGGCC TGCCCCGGTCCCTGCACATCGACAGCATTGAGCCCATTGATCGGTGA
Upstream 100 bases:
>100_bases GAAGCGTTCAGCCTGCGCAGAAGTACTCAAAAGGGCTCAGTCACATTTGGTCAGGCCAGGGGCTGGACCAGTCACAGTTC TGTGATTCGCATGGGTCTTA
Downstream 100 bases:
>100_bases GCAGTCGCTGATCCGGTGATGCTCGTAACACTCCGGTCGTCAGAAAAGTGCGACGTTTCGCGAACTCACAGCTGATTCGG GGCTTTTCCCGAGCAGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKVRNETGPRSQPRTRHFELRCRAVEFFFGQAQERPSTLPSMAFTLPLIAALLGGSLVSQVPLQVQPYRGGSEEESSAEE PRPEAENDSVDNDWLRVPSDEPEERASELQAPPLTPPPAFNKRRFKKPTVRPGLPRSLHIDSIEPIDR
Sequences:
>Translated_148_residues MKVRNETGPRSQPRTRHFELRCRAVEFFFGQAQERPSTLPSMAFTLPLIAALLGGSLVSQVPLQVQPYRGGSEEESSAEE PRPEAENDSVDNDWLRVPSDEPEERASELQAPPLTPPPAFNKRRFKKPTVRPGLPRSLHIDSIEPIDR >Mature_148_residues MKVRNETGPRSQPRTRHFELRCRAVEFFFGQAQERPSTLPSMAFTLPLIAALLGGSLVSQVPLQVQPYRGGSEEESSAEE PRPEAENDSVDNDWLRVPSDEPEERASELQAPPLTPPPAFNKRRFKKPTVRPGLPRSLHIDSIEPIDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16667; Mature: 16667
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRNETGPRSQPRTRHFELRCRAVEFFFGQAQERPSTLPSMAFTLPLIAALLGGSLVSQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH VPLQVQPYRGGSEEESSAEEPRPEAENDSVDNDWLRVPSDEPEERASELQAPPLTPPPAF CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCC NKRRFKKPTVRPGLPRSLHIDSIEPIDR CCCCCCCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure MKVRNETGPRSQPRTRHFELRCRAVEFFFGQAQERPSTLPSMAFTLPLIAALLGGSLVSQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH VPLQVQPYRGGSEEESSAEEPRPEAENDSVDNDWLRVPSDEPEERASELQAPPLTPPPAF CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCC NKRRFKKPTVRPGLPRSLHIDSIEPIDR CCCCCCCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA