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The map label for this gene is yciC [H]

Identifier: 148242727

GI number: 148242727

Start: 1427057

End: 1428130

Strand: Direct

Name: yciC [H]

Synonym: SynRCC307_1628

Alternate gene names: 148242727

Gene position: 1427057-1428130 (Clockwise)

Preceding gene: 148242726

Following gene: 148242728

Centisome position: 64.14

GC content: 56.8

Gene sequence:

>1074_bases
GTGACCTTGACTTCGACTCACAGCCATAGCCCTGTTCCTGTCACGATCCTGACGGGATTTCTAGGGGCAGGTAAAACGAC
CCTCTTGAACCACATCCTGGCCAATCAGGAGGGACTAAAAACGGCCGTTCTGGTGAACGAGTTCGGCGAGATCGGTATTG
ATAACGAGCTGATCATCAGCACCAGTGAAGACATGGTTGAGCTGAGCAATGGCTGCATCTGCTGCACGATCAACGACGAA
CTGCTCAACACCGTTTTTAAGGTGCTGGACCGGCCGGAGCCGCTCGACTACTTGGTGGTGGAAACAACCGGACTTGCTGA
TCCCCTGCCGGTGGCAATGACGTTTCTAGGCAGTGATCTGCGCAATGAAACGCGCCTCGATTCGATCATCACCGTGATTG
ATGCCGAGAATTTTGGCGAGGAGATCCTCGATACCGAGGTGGGCCGGGCTCAGGTGCTCTACGGCGACATCTTGATGCTG
AACAAAACCGATCTGGTCTCCGCTGAGCGCGTCAAGGAACTGGAGGGCCAGCTGAGCGAGATCAAAACCGACGCCCGCTT
TTTGCATGCCGTAAAAGGGGAGGTAGCCCTGCCCCTGCTTCTGAGCGTGGGGTTATTTGAATCCGACCGCGTGGTGCGTG
AACAAGCCGCAGCCGATGACGGCCACGACCACAGCCATTGCGATCACGACCATGGCCACTGTGAGCACGATCACGACCAT
GGCCACAGCCATCACCACCATCACCACGACCACAGCCACGACGGCTCAATCGAAGGCTTCACCTCACTCTCATTCCGTTC
CGACAAACCGATGGGGCTGAGGAAGTTTCAGAACTTCCTCGACAACCAACTACCGGCGTCGGTGTTTCGCTCAAAAGGGA
TCCTCTGGTTCAACGAAAGCGAGCGGCGCCATGTGTTCCACCTGGCGGGCAAACGTTTCTCAATCGATGACACCGATTGG
GATGGCCCGCGCAGCAACCAACTGGTGCTGATCGGCCGCGATCTCGACCACGACAAGCTCAAGCAGCAACTTCAGGCTTG
CTTAGCCCCTGATGCCGGCCGCGGATTCTCCTAA

Upstream 100 bases:

>100_bases
TGTTCTGCAGAACCTTCAGCAAGAACTCAGCGAAACAATGGAGGGCTGGGTGAACTGCGGCGGCCGTTTAGACGCCACAC
TGATGTGAGAACCGTTCTCG

Downstream 100 bases:

>100_bases
TGCTGGCTGAGGCGTTCAGCACCAGCCTCACCAGTGCCCTGATCGGAGCGGTCGCTGGCGCCATGGGCGCCCTGCTGATG
GCTTTGATCAGCTGGCTGAT

Product: G3E family GTPase/cobalamin synthesis family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MTLTSTHSHSPVPVTILTGFLGAGKTTLLNHILANQEGLKTAVLVNEFGEIGIDNELIISTSEDMVELSNGCICCTINDE
LLNTVFKVLDRPEPLDYLVVETTGLADPLPVAMTFLGSDLRNETRLDSIITVIDAENFGEEILDTEVGRAQVLYGDILML
NKTDLVSAERVKELEGQLSEIKTDARFLHAVKGEVALPLLLSVGLFESDRVVREQAAADDGHDHSHCDHDHGHCEHDHDH
GHSHHHHHHDHSHDGSIEGFTSLSFRSDKPMGLRKFQNFLDNQLPASVFRSKGILWFNESERRHVFHLAGKRFSIDDTDW
DGPRSNQLVLIGRDLDHDKLKQQLQACLAPDAGRGFS

Sequences:

>Translated_357_residues
MTLTSTHSHSPVPVTILTGFLGAGKTTLLNHILANQEGLKTAVLVNEFGEIGIDNELIISTSEDMVELSNGCICCTINDE
LLNTVFKVLDRPEPLDYLVVETTGLADPLPVAMTFLGSDLRNETRLDSIITVIDAENFGEEILDTEVGRAQVLYGDILML
NKTDLVSAERVKELEGQLSEIKTDARFLHAVKGEVALPLLLSVGLFESDRVVREQAAADDGHDHSHCDHDHGHCEHDHDH
GHSHHHHHHDHSHDGSIEGFTSLSFRSDKPMGLRKFQNFLDNQLPASVFRSKGILWFNESERRHVFHLAGKRFSIDDTDW
DGPRSNQLVLIGRDLDHDKLKQQLQACLAPDAGRGFS
>Mature_356_residues
TLTSTHSHSPVPVTILTGFLGAGKTTLLNHILANQEGLKTAVLVNEFGEIGIDNELIISTSEDMVELSNGCICCTINDEL
LNTVFKVLDRPEPLDYLVVETTGLADPLPVAMTFLGSDLRNETRLDSIITVIDAENFGEEILDTEVGRAQVLYGDILMLN
KTDLVSAERVKELEGQLSEIKTDARFLHAVKGEVALPLLLSVGLFESDRVVREQAAADDGHDHSHCDHDHGHCEHDHDHG
HSHHHHHHDHSHDGSIEGFTSLSFRSDKPMGLRKFQNFLDNQLPASVFRSKGILWFNESERRHVFHLAGKRFSIDDTDWD
GPRSNQLVLIGRDLDHDKLKQQLQACLAPDAGRGFS

Specific function: May bind GTP. Might act as metal chaperone (Potential). Contributes to optimal growth under starvation for zinc [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=358, Percent_Identity=32.9608938547486, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI126722884, Length=358, Percent_Identity=32.9608938547486, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI148727351, Length=358, Percent_Identity=32.9608938547486, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI146231952, Length=358, Percent_Identity=33.2402234636872, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI223941779, Length=193, Percent_Identity=39.8963730569948, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI223941776, Length=346, Percent_Identity=32.0809248554913, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI119120938, Length=133, Percent_Identity=41.3533834586466, Blast_Score=106, Evalue=3e-23,
Organism=Escherichia coli, GI87082430, Length=346, Percent_Identity=30.9248554913295, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1788499, Length=182, Percent_Identity=31.8681318681319, Blast_Score=90, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6324356, Length=234, Percent_Identity=29.4871794871795, Blast_Score=108, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 39670; Mature: 39539

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTSTHSHSPVPVTILTGFLGAGKTTLLNHILANQEGLKTAVLVNEFGEIGIDNELIIS
CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEE
TSEDMVELSNGCICCTINDELLNTVFKVLDRPEPLDYLVVETTGLADPLPVAMTFLGSDL
CCHHHHHHCCCEEEEEECHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
RNETRLDSIITVIDAENFGEEILDTEVGRAQVLYGDILMLNKTDLVSAERVKELEGQLSE
CCHHHHHHHEEEEECHHHHHHHHHCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHH
IKTDARFLHAVKGEVALPLLLSVGLFESDRVVREQAAADDGHDHSHCDHDHGHCEHDHDH
HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GHSHHHHHHDHSHDGSIEGFTSLSFRSDKPMGLRKFQNFLDNQLPASVFRSKGILWFNES
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEEECCC
ERRHVFHLAGKRFSIDDTDWDGPRSNQLVLIGRDLDHDKLKQQLQACLAPDAGRGFS
CCCEEEEECCCEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TLTSTHSHSPVPVTILTGFLGAGKTTLLNHILANQEGLKTAVLVNEFGEIGIDNELIIS
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEE
TSEDMVELSNGCICCTINDELLNTVFKVLDRPEPLDYLVVETTGLADPLPVAMTFLGSDL
CCHHHHHHCCCEEEEEECHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
RNETRLDSIITVIDAENFGEEILDTEVGRAQVLYGDILMLNKTDLVSAERVKELEGQLSE
CCHHHHHHHEEEEECHHHHHHHHHCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHH
IKTDARFLHAVKGEVALPLLLSVGLFESDRVVREQAAADDGHDHSHCDHDHGHCEHDHDH
HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GHSHHHHHHDHSHDGSIEGFTSLSFRSDKPMGLRKFQNFLDNQLPASVFRSKGILWFNES
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEEECCC
ERRHVFHLAGKRFSIDDTDWDGPRSNQLVLIGRDLDHDKLKQQLQACLAPDAGRGFS
CCCEEEEECCCEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 9811636 [H]