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The map label for this gene is ycgR [H]

Identifier: 148242714

GI number: 148242714

Start: 1419117

End: 1420115

Strand: Direct

Name: ycgR [H]

Synonym: SynRCC307_1615

Alternate gene names: 148242714

Gene position: 1419117-1420115 (Clockwise)

Preceding gene: 148242710

Following gene: 148242715

Centisome position: 63.78

GC content: 61.46

Gene sequence:

>999_bases
ATGGGAATCGTTCTCAAACTAGGAATGAATTGGCCCGATGGCTCCCAATGGCAGACCGTTTGGGCGGTTTTTCAAGGGTT
GCTGCTGGAAGCCATTCCTTTTTTGCTGATTGGCGTGGCCATTGCCACGGCCGCGCGGGCATGGGATCCCCGCGGCCGCT
GGCTACAACGGCTGCCGCGCCATCCCTTGCTCGGCCCGCTGAGTGGCGCCGCTTTGGGCTTTGCACTGCCGGCCTGTGAA
TGCGGCAACGTGCCGGTGGCCCGGCGCTTGTTGGCCCAAGGCGCGCCCATGGGAGCGTCATTGGGATTCCTCTTTGCAGC
ACCGGTGCTCAACCCAATCGTGCTGCTGAGCACCTGGGCCGCCTTCCCTGATCGCCCTTGGTTATTGCTGCTGCGCCCGC
TTGGCAGCGTGGTGATTGCGCTGGTGCTCACCACATTGCTGCAACAACTCAGTGAAGCTGCCTTGCTGGCCCCTGATCTG
TTGGAGGAGCGGCGCATGGGCCAGCCCTTGGCCACCGCCAGCCTGCTGGATCGACGTAGCGGCTTGATCGGCAACCAACC
ACTGAGCACAACGCCTGCCATCGCAGCCGAACGACCCTCAATGGGCGTGCTGCTGGATCACGGTCTGCGGGAATTTTTGG
AATTGGGCAGCCTGCTGCTGCTGGGTTGCGGCATCGCCGCCACGATCCAAACCCTGATTCCCCGCGATCTGTTTCTCGCC
GTTGGCCAAGCACCAACCCTGTCGGTGTTGAGCTTGATGCTGCTGGCGGTGGTGGTGAGCGTGTGCTCCAGCGTGGATGC
CTTTTTGGCCTTGGGATTTGCAGCGATGGTGACCCCTGGGGCACTGCTGGCATTTCTGCTGCTCGGGCCGGTGATCGATT
TAAAAAGCATCAGCCTGTTTAGCCGCATCTTTCGCCGCCGCGGCATCCTTTTGATGCTGGCTGGCGTTGTGGTGGCAGTG
CTGTTGATCGGCCAATGGCTCAACTTGGTGCTGCTATGA

Upstream 100 bases:

>100_bases
GGCTCAGTTGAAGAACAGGCCACCGCCATCGCCAACAGCGGCACAGATGCCAGAGTCCCCGCCAACCTTCTGAGACAACG
AGCCACGCCGTTCAACCTGA

Downstream 100 bases:

>100_bases
ACTGGCTCCCGCCATTTGTGCTGGGGCTTTGGGGCGCTGTGCTGCTGCAGGCCTGGGGCAGCGGCCGGCTGAATCTGCTG
TTGCAAGCTGATTTCCACTG

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MGIVLKLGMNWPDGSQWQTVWAVFQGLLLEAIPFLLIGVAIATAARAWDPRGRWLQRLPRHPLLGPLSGAALGFALPACE
CGNVPVARRLLAQGAPMGASLGFLFAAPVLNPIVLLSTWAAFPDRPWLLLLRPLGSVVIALVLTTLLQQLSEAALLAPDL
LEERRMGQPLATASLLDRRSGLIGNQPLSTTPAIAAERPSMGVLLDHGLREFLELGSLLLLGCGIAATIQTLIPRDLFLA
VGQAPTLSVLSLMLLAVVVSVCSSVDAFLALGFAAMVTPGALLAFLLLGPVIDLKSISLFSRIFRRRGILLMLAGVVVAV
LLIGQWLNLVLL

Sequences:

>Translated_332_residues
MGIVLKLGMNWPDGSQWQTVWAVFQGLLLEAIPFLLIGVAIATAARAWDPRGRWLQRLPRHPLLGPLSGAALGFALPACE
CGNVPVARRLLAQGAPMGASLGFLFAAPVLNPIVLLSTWAAFPDRPWLLLLRPLGSVVIALVLTTLLQQLSEAALLAPDL
LEERRMGQPLATASLLDRRSGLIGNQPLSTTPAIAAERPSMGVLLDHGLREFLELGSLLLLGCGIAATIQTLIPRDLFLA
VGQAPTLSVLSLMLLAVVVSVCSSVDAFLALGFAAMVTPGALLAFLLLGPVIDLKSISLFSRIFRRRGILLMLAGVVVAV
LLIGQWLNLVLL
>Mature_331_residues
GIVLKLGMNWPDGSQWQTVWAVFQGLLLEAIPFLLIGVAIATAARAWDPRGRWLQRLPRHPLLGPLSGAALGFALPACEC
GNVPVARRLLAQGAPMGASLGFLFAAPVLNPIVLLSTWAAFPDRPWLLLLRPLGSVVIALVLTTLLQQLSEAALLAPDLL
EERRMGQPLATASLLDRRSGLIGNQPLSTTPAIAAERPSMGVLLDHGLREFLELGSLLLLGCGIAATIQTLIPRDLFLAV
GQAPTLSVLSLMLLAVVVSVCSSVDAFLALGFAAMVTPGALLAFLLLGPVIDLKSISLFSRIFRRRGILLMLAGVVVAVL
LIGQWLNLVLL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 35260; Mature: 35129

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIVLKLGMNWPDGSQWQTVWAVFQGLLLEAIPFLLIGVAIATAARAWDPRGRWLQRLPR
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
HPLLGPLSGAALGFALPACECGNVPVARRLLAQGAPMGASLGFLFAAPVLNPIVLLSTWA
CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AFPDRPWLLLLRPLGSVVIALVLTTLLQQLSEAALLAPDLLEERRMGQPLATASLLDRRS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GLIGNQPLSTTPAIAAERPSMGVLLDHGLREFLELGSLLLLGCGIAATIQTLIPRDLFLA
CCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VGQAPTLSVLSLMLLAVVVSVCSSVDAFLALGFAAMVTPGALLAFLLLGPVIDLKSISLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRIFRRRGILLMLAGVVVAVLLIGQWLNLVLL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GIVLKLGMNWPDGSQWQTVWAVFQGLLLEAIPFLLIGVAIATAARAWDPRGRWLQRLPR
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
HPLLGPLSGAALGFALPACECGNVPVARRLLAQGAPMGASLGFLFAAPVLNPIVLLSTWA
CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AFPDRPWLLLLRPLGSVVIALVLTTLLQQLSEAALLAPDLLEERRMGQPLATASLLDRRS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GLIGNQPLSTTPAIAAERPSMGVLLDHGLREFLELGSLLLLGCGIAATIQTLIPRDLFLA
CCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VGQAPTLSVLSLMLLAVVVSVCSSVDAFLALGFAAMVTPGALLAFLLLGPVIDLKSISLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRIFRRRGILLMLAGVVVAVLLIGQWLNLVLL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]