Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242666

Identifier: 148242666

GI number: 148242666

Start: 1386024

End: 1386446

Strand: Direct

Name: 148242666

Synonym: SynRCC307_1567

Alternate gene names: NA

Gene position: 1386024-1386446 (Clockwise)

Preceding gene: 148242665

Following gene: 148242667

Centisome position: 62.3

GC content: 62.88

Gene sequence:

>423_bases
ATGCGTTCACCAGCGAGGGTTGAAATTCTGCCGATGCACGCCAGCCAAGCTGGCTCCACCCTGTTTTCATCGCCCCAACC
CAGCGACGAGACCCTGATTGCCACGGTGGGCACCGCCCCATCCCACGAACTCTTCTGCCACCGCAAGCAGACCGACCAAC
TGCTGCTGCTTCAAGGCGAGGTGGATCTTGTGGTGCTGCAAGACAAACAGCTGCACACCATCCCCATGCGCGTGGAGAAC
GCCTGCTGGATTCGCATCCCCCCTGGGATTCCCCATGGCGCCATCAACCGCGGGGGATCACCGGCGCTGATGGTGAATGC
CGTGCAGCGTCATGGCGAACCCGATGCCCGTGACTACCGGCCGCTGCCCATCCCCATCAGCCTGCAGCAGGCCTGGATCA
GCTTGGTGAACGGGCCGGCTTAA

Upstream 100 bases:

>100_bases
ATCGTCAGCAACTGCCCACACGGGCAGGGTCAATTCGTACGTTTCAACACGACCAGCGAGAAATTCGCACGGCACGCTCG
GGGTACTTCTAAGTACCCCG

Downstream 100 bases:

>100_bases
CCGCTGCTTGCGCTGCCGTCTTGTGGAGAGGCGCCGCGCAAAACACAATGTGCTCATCTCAGACCTCCAGGCCAACGATG
AGCAGCTCCACACCAGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MRSPARVEILPMHASQAGSTLFSSPQPSDETLIATVGTAPSHELFCHRKQTDQLLLLQGEVDLVVLQDKQLHTIPMRVEN
ACWIRIPPGIPHGAINRGGSPALMVNAVQRHGEPDARDYRPLPIPISLQQAWISLVNGPA

Sequences:

>Translated_140_residues
MRSPARVEILPMHASQAGSTLFSSPQPSDETLIATVGTAPSHELFCHRKQTDQLLLLQGEVDLVVLQDKQLHTIPMRVEN
ACWIRIPPGIPHGAINRGGSPALMVNAVQRHGEPDARDYRPLPIPISLQQAWISLVNGPA
>Mature_140_residues
MRSPARVEILPMHASQAGSTLFSSPQPSDETLIATVGTAPSHELFCHRKQTDQLLLLQGEVDLVVLQDKQLHTIPMRVEN
ACWIRIPPGIPHGAINRGGSPALMVNAVQRHGEPDARDYRPLPIPISLQQAWISLVNGPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15289; Mature: 15289

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPARVEILPMHASQAGSTLFSSPQPSDETLIATVGTAPSHELFCHRKQTDQLLLLQGE
CCCCCEEEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEECC
VDLVVLQDKQLHTIPMRVENACWIRIPPGIPHGAINRGGSPALMVNAVQRHGEPDARDYR
EEEEEECCCCEEEECEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCC
PLPIPISLQQAWISLVNGPA
CCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSPARVEILPMHASQAGSTLFSSPQPSDETLIATVGTAPSHELFCHRKQTDQLLLLQGE
CCCCCEEEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEECC
VDLVVLQDKQLHTIPMRVENACWIRIPPGIPHGAINRGGSPALMVNAVQRHGEPDARDYR
EEEEEECCCCEEEECEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCC
PLPIPISLQQAWISLVNGPA
CCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA