Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242657

Identifier: 148242657

GI number: 148242657

Start: 1376629

End: 1376874

Strand: Direct

Name: 148242657

Synonym: SynRCC307_1558

Alternate gene names: NA

Gene position: 1376629-1376874 (Clockwise)

Preceding gene: 148242656

Following gene: 148242658

Centisome position: 61.87

GC content: 60.57

Gene sequence:

>246_bases
ATGCTGGGCATGGATTCCGATCTCTACCTACTGGCCTGGAGCAAGCTTCAGGAAGCCGCCTTCCTGTGGCTCAGTGATGT
GCCCCTGTCCGTGAGCACCCGCGAAGAACTGCAGGGGTTGATGCAGCGGCTCTCACCATCGGAACTGGCGGCCTTTGGCG
CCAGGCTGAGGCCCGTGCTTAGCGACAGTCAGCATGTGCAGAGCTTCATTGAAATGGTGCTAGCCCCCCGCTCTCAGGCC
TGCTAA

Upstream 100 bases:

>100_bases
ACTTGCTGAGTCCGCCGTTAGACAGCCTCGAGGCGTAACGCTTCTCGCCAAGGGCTGGCCTCAGGGCAGGCCGCTCTGCC
AGGTTGCCAATGGACCGCTG

Downstream 100 bases:

>100_bases
AAGCAGCCTATGGAGCGCTGCACTCGTCCCTGGGGTTGGTACGAAACCCTCACCGAAGGAGAGGGTTATCTCGTCAAGCG
GCTGTGGCTCGAACCCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MLGMDSDLYLLAWSKLQEAAFLWLSDVPLSVSTREELQGLMQRLSPSELAAFGARLRPVLSDSQHVQSFIEMVLAPRSQA
C

Sequences:

>Translated_81_residues
MLGMDSDLYLLAWSKLQEAAFLWLSDVPLSVSTREELQGLMQRLSPSELAAFGARLRPVLSDSQHVQSFIEMVLAPRSQA
C
>Mature_81_residues
MLGMDSDLYLLAWSKLQEAAFLWLSDVPLSVSTREELQGLMQRLSPSELAAFGARLRPVLSDSQHVQSFIEMVLAPRSQA
C

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9038; Mature: 9038

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGMDSDLYLLAWSKLQEAAFLWLSDVPLSVSTREELQGLMQRLSPSELAAFGARLRPVL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC
SDSQHVQSFIEMVLAPRSQAC
CCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLGMDSDLYLLAWSKLQEAAFLWLSDVPLSVSTREELQGLMQRLSPSELAAFGARLRPVL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC
SDSQHVQSFIEMVLAPRSQAC
CCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA