Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242634

Identifier: 148242634

GI number: 148242634

Start: 1354515

End: 1355225

Strand: Direct

Name: 148242634

Synonym: SynRCC307_1535

Alternate gene names: NA

Gene position: 1354515-1355225 (Clockwise)

Preceding gene: 148242631

Following gene: 148242635

Centisome position: 60.88

GC content: 55.98

Gene sequence:

>711_bases
TTGCACTTTTTTTATGTCGCCATCAAACAATCTCGCCATCATGAAATCAGTGACGTGGGCGCGGCCATGCGCGTTGGGTT
TTTGCCCTTTGGGCTGGTGGCATTGCTGGGATTGAGCGCCTGCAGCGCCATCCAAAACAGCGGCCAAGATCAACCCACCA
TCAGCATCGAGCTCGATACGGCTGATCCCGCCAAGAGCGAGGGCACCCTGCAGAGCAAACCAACGCCTGTGAGCTTTCAG
GTGGGCTACGGCAAGTACGGCATTGCCTGCGCCGATACCAGCTTTCGCGAAGGCGAAACACCCTTGGGCACCTTCAAGGT
CAACGCGATCTTGACCCCCGATCGCTTTGAGATGGACTCTGCCCTGATCAAGCAGTCCGGCAAATCCAAGGAGTACCTGG
AACAGAATCTGTTTAAGAACATGAGCGCCATCGACTTCAAGGGAGATGGCGAAACCGGTGAATACGGCAAGGGCTACATC
AGCCTCATGCCCCTGACCGAAACCGAGCAGCCGTTCAAGTTCAACGAATACGACGGCAAGTTCCGCTGGTACAGCTTTGC
GATCCATGGCACCAACAACAACAGTCGGGTTGGCCAAAAGATCACGGGGGGCTGCATCAATGTTGATGACGCCACCATGG
CCACACTGCTCAAGAGCGTGAAGCTGGGCGATGAGGTCGTTGTCAGCAGCGACGGCCCCTGCAACGAATAA

Upstream 100 bases:

>100_bases
AGCTCTGCTGGCTCCAAATACGTCCAAGACTCGTCCACAACCATGCACACGCATCAGTACACCTGTACTAGCTGCGGCGG
CGAGGCATGGCAAGCGCTGC

Downstream 100 bases:

>100_bases
ATCCCCTACCCAGCTCAGGGCAGTTGGGCTAGAGCTGGGAAATGAAAAACGTGATTTGCTCCAGCTGCGGAGCTCGCGTG
CAGATCGCAAGCCACGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MHFFYVAIKQSRHHEISDVGAAMRVGFLPFGLVALLGLSACSAIQNSGQDQPTISIELDTADPAKSEGTLQSKPTPVSFQ
VGYGKYGIACADTSFREGETPLGTFKVNAILTPDRFEMDSALIKQSGKSKEYLEQNLFKNMSAIDFKGDGETGEYGKGYI
SLMPLTETEQPFKFNEYDGKFRWYSFAIHGTNNNSRVGQKITGGCINVDDATMATLLKSVKLGDEVVVSSDGPCNE

Sequences:

>Translated_236_residues
MHFFYVAIKQSRHHEISDVGAAMRVGFLPFGLVALLGLSACSAIQNSGQDQPTISIELDTADPAKSEGTLQSKPTPVSFQ
VGYGKYGIACADTSFREGETPLGTFKVNAILTPDRFEMDSALIKQSGKSKEYLEQNLFKNMSAIDFKGDGETGEYGKGYI
SLMPLTETEQPFKFNEYDGKFRWYSFAIHGTNNNSRVGQKITGGCINVDDATMATLLKSVKLGDEVVVSSDGPCNE
>Mature_236_residues
MHFFYVAIKQSRHHEISDVGAAMRVGFLPFGLVALLGLSACSAIQNSGQDQPTISIELDTADPAKSEGTLQSKPTPVSFQ
VGYGKYGIACADTSFREGETPLGTFKVNAILTPDRFEMDSALIKQSGKSKEYLEQNLFKNMSAIDFKGDGETGEYGKGYI
SLMPLTETEQPFKFNEYDGKFRWYSFAIHGTNNNSRVGQKITGGCINVDDATMATLLKSVKLGDEVVVSSDGPCNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25696; Mature: 25696

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFFYVAIKQSRHHEISDVGAAMRVGFLPFGLVALLGLSACSAIQNSGQDQPTISIELDT
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
ADPAKSEGTLQSKPTPVSFQVGYGKYGIACADTSFREGETPLGTFKVNAILTPDRFEMDS
CCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHHH
ALIKQSGKSKEYLEQNLFKNMSAIDFKGDGETGEYGKGYISLMPLTETEQPFKFNEYDGK
HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCE
FRWYSFAIHGTNNNSRVGQKITGGCINVDDATMATLLKSVKLGDEVVVSSDGPCNE
EEEEEEEEEECCCCCCCCHHHCCCEEECCHHHHHHHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MHFFYVAIKQSRHHEISDVGAAMRVGFLPFGLVALLGLSACSAIQNSGQDQPTISIELDT
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
ADPAKSEGTLQSKPTPVSFQVGYGKYGIACADTSFREGETPLGTFKVNAILTPDRFEMDS
CCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHHH
ALIKQSGKSKEYLEQNLFKNMSAIDFKGDGETGEYGKGYISLMPLTETEQPFKFNEYDGK
HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCE
FRWYSFAIHGTNNNSRVGQKITGGCINVDDATMATLLKSVKLGDEVVVSSDGPCNE
EEEEEEEEEECCCCCCCCHHHCCCEEECCHHHHHHHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA