| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242543
Identifier: 148242543
GI number: 148242543
Start: 1284251
End: 1284745
Strand: Direct
Name: 148242543
Synonym: SynRCC307_1444
Alternate gene names: NA
Gene position: 1284251-1284745 (Clockwise)
Preceding gene: 148242542
Following gene: 148242544
Centisome position: 57.72
GC content: 67.68
Gene sequence:
>495_bases ATGGCCGATCAGGATCGGGAACAAGGAGGACGCGGGCGCTCTCGCCAAGGCGGCCAGCGCGATGGTGCTGGCGGCTTCCG GATCCGCCTAAGCGATAACGAATTGCAGGCGGCCCGCACGCTGCAAGAAGCCTTTCAACTGCGCTCCACCGTGGCCGTGC TGGGTTTCTCCCTGCGCACCATGGCTGATCTGCTGGAGCAGGGGGCCCTCGATGAGGTGATCAGTCAGCAGAAGCGCAGC GGTGGCGGCCGTCCCCCGCGCGGCGAACGCCGAGGCGGCGATGGCCAAGGCCAGCGCGATGCACGCCCCAACCCGTTTGC CCGTCCCAGCAAGCCTGCGGCTCCCGAGCCCGAGCCCGAACCCGCGGCTGAAGAGCCTGCTGCTGCTGCTGACGAAGAGA CAACAACGGAATCAGCAGCGGCCAGCGAAGAAGCCAGCGAAGAAGCCAGCACCGAAGCGGCCAGCGAGGCCACTAGCACC GAAGCGGAGGCCTGA
Upstream 100 bases:
>100_bases GTCTTGCCGCGCCGCGACGGCAAACAACGGCTGAGCTGTCACTGGCTGCCCCAAACGACCGGCGATAGGCCAAACTGAGC CGCTGCAACGGGCAGGGTTG
Downstream 100 bases:
>100_bases TGGCAAGACCCAGGGTGCTGTCGGGTGTTCAGCCCACAGGGTCTTTGCATCTCGGCAACTGGCTTGGAGCCATCCGCAAT TGGGTGGACCTGCAACGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MADQDREQGGRGRSRQGGQRDGAGGFRIRLSDNELQAARTLQEAFQLRSTVAVLGFSLRTMADLLEQGALDEVISQQKRS GGGRPPRGERRGGDGQGQRDARPNPFARPSKPAAPEPEPEPAAEEPAAAADEETTTESAAASEEASEEASTEAASEATST EAEA
Sequences:
>Translated_164_residues MADQDREQGGRGRSRQGGQRDGAGGFRIRLSDNELQAARTLQEAFQLRSTVAVLGFSLRTMADLLEQGALDEVISQQKRS GGGRPPRGERRGGDGQGQRDARPNPFARPSKPAAPEPEPEPAAEEPAAAADEETTTESAAASEEASEEASTEAASEATST EAEA >Mature_163_residues ADQDREQGGRGRSRQGGQRDGAGGFRIRLSDNELQAARTLQEAFQLRSTVAVLGFSLRTMADLLEQGALDEVISQQKRSG GGRPPRGERRGGDGQGQRDARPNPFARPSKPAAPEPEPEPAAEEPAAAADEETTTESAAASEEASEEASTEAASEATSTE AEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17249; Mature: 17117
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQDREQGGRGRSRQGGQRDGAGGFRIRLSDNELQAARTLQEAFQLRSTVAVLGFSLRT CCCCCCHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MADLLEQGALDEVISQQKRSGGGRPPRGERRGGDGQGQRDARPNPFARPSKPAAPEPEPE HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAAEEPAAAADEETTTESAAASEEASEEASTEAASEATSTEAEA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADQDREQGGRGRSRQGGQRDGAGGFRIRLSDNELQAARTLQEAFQLRSTVAVLGFSLRT CCCCCHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MADLLEQGALDEVISQQKRSGGGRPPRGERRGGDGQGQRDARPNPFARPSKPAAPEPEPE HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAAEEPAAAADEETTTESAAASEEASEEASTEAASEATSTEAEA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA