| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242502
Identifier: 148242502
GI number: 148242502
Start: 1249336
End: 1249617
Strand: Direct
Name: 148242502
Synonym: SynRCC307_1403
Alternate gene names: NA
Gene position: 1249336-1249617 (Clockwise)
Preceding gene: 148242501
Following gene: 148242504
Centisome position: 56.15
GC content: 51.77
Gene sequence:
>282_bases GTGCCGAAGCTGCGCGATCAGGACGGAGAGTTTGAGGGGCCAATTCCATCAGGCGAAGCGGGTACCCACTCGCCGATGGA AAGTCATACGGGTTATCGGGGGGATGATTGGTCCCCTCAACGGCTGGTGTTCCACCAAAATCTGGAACAATTTGCTGAGC GAGTTGGCTTGATCGTTGCCTTGCAAGGCAACGGAAAAATCAGCCAAGAAAAAGCTTTCAGTGAGATCCGCCAAATTTGG AAGGATCTCAAAGAAAGCCGAGGTGAGTTACTGGATTTGTAG
Upstream 100 bases:
>100_bases TTCGCGAGCATCCCTGAAAAGGATCGTTTCAGCCCTCTTTTACCTGTTAATAGCTAAGCGGGGACATAGTAGGAAGACTG CCGATTAGCCATTACACCCC
Downstream 100 bases:
>100_bases TCCTATTTGAACGGTTTTAAATCGCGTGAATCGGTCGTTGATCGATCACCTTGTCGATCAGGCCATACTCAGCCGCCTCA GCGGGAGACATGAAAAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MPKLRDQDGEFEGPIPSGEAGTHSPMESHTGYRGDDWSPQRLVFHQNLEQFAERVGLIVALQGNGKISQEKAFSEIRQIW KDLKESRGELLDL
Sequences:
>Translated_93_residues MPKLRDQDGEFEGPIPSGEAGTHSPMESHTGYRGDDWSPQRLVFHQNLEQFAERVGLIVALQGNGKISQEKAFSEIRQIW KDLKESRGELLDL >Mature_92_residues PKLRDQDGEFEGPIPSGEAGTHSPMESHTGYRGDDWSPQRLVFHQNLEQFAERVGLIVALQGNGKISQEKAFSEIRQIWK DLKESRGELLDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10535; Mature: 10404
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLRDQDGEFEGPIPSGEAGTHSPMESHTGYRGDDWSPQRLVFHQNLEQFAERVGLIVA CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEE LQGNGKISQEKAFSEIRQIWKDLKESRGELLDL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PKLRDQDGEFEGPIPSGEAGTHSPMESHTGYRGDDWSPQRLVFHQNLEQFAERVGLIVA CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEE LQGNGKISQEKAFSEIRQIWKDLKESRGELLDL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA