| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is pykF [H]
Identifier: 148242498
GI number: 148242498
Start: 1243875
End: 1245659
Strand: Direct
Name: pykF [H]
Synonym: SynRCC307_1399
Alternate gene names: 148242498
Gene position: 1243875-1245659 (Clockwise)
Preceding gene: 148242494
Following gene: 148242499
Centisome position: 55.91
GC content: 62.58
Gene sequence:
>1785_bases ATGCCCCTGCCCGATCATCAGCGACGCACCAAAATCGTCGCCACAATCGGGCCGGCCACAGAATCACCAGACAGCATTCG GCAGCTGATTCTGGCCGGTGCCACAACCTTCCGACTGAACTTCTCCCACGGAGATCACGAGGAGCATGCCCAGCGCGCCG CCACGATCAGACAGGTGGCCCATGAACTGGGAGTTCACGTTGGAATCCTGCAAGACCTGCAAGGGCCCAAGATCCGCCTC GGCCGTTTTGCCGACGGTCCAATCACCGTGGCCAAGGGGGATTCCTTCGCCCTAACGGCGCGCGATGTGCCCTGCACCCA AAGCATCGCCACAGTCACCTACGACAAGCTGGCCAGCGAAGTGGAGCCCGGCAGCCGCATCCTTCTTGATGACGGCAAGG TGGAGATGAAGGTCGACTGGATCGACCAGGCCGAACAGACCCTGCACTGCAAGATCACCGTTGGCGGCAAGCTCTCCAAC AACAAAGGCGTCAACTTCCCCGACTGCCTGCTCTCGGTCCGCGCGCTGACGGCCAAAGACCGTAATGACCTGGCCTTTGG TTTGCAGCTCGGCGTCGACTGGGTGGCGCTCAGCTTTGTGCGCAACCCCTCGGATATGCAGGAGATCAAGGAGCTAATCA GCTCCTTGGGCCATGCCACACCCGTGGTAGCCAAGATCGAAAAATTTGAGGCGATCGATCAGATCGACGCCATCCTGCCG CTCTGCGACGGCGTCATGGTGGCCCGTGGCGACCTGGGCGTGGAGATGGCGGCCGAGGAAGTGCCCCTGCTGCAGAAGGA GCTGATCCGCAAGGCCAACTCCATGGGCATCCCGATCATCACGGCCACCCAGATGCTCGACAGCATGGTGGCCAATGCCC GGCCCACCCGCGCTGAGGTGAGCGATGTGGCGAACGCGATCCTCGATGGCACCGATGCGGTGATGCTCTCCAACGAAACC GCCGTTGGCGACTACGCCGTTGAGGCCGTGGAAACCATGGACCGGATCGCCAGGCGCATTGAAAAGGATTACCCAAACCG CCAGCCCGACACCCAGCTGGCCTGCACGATCCCCAACGCCATCAGCATGGCGGTGAGCACGATCGCCACCCAACTCGATG CGGCCGCGATCTTGACGCTCACCAAAAGTGGCGCCACGGGGCGCACCGTCAGCAAGTTCCGCCCCTCAACGCCAATCCTG GCGATCACCAGCGACGTCAAGGTGGCCCGCCAGCTGCAACTGGTTTGGGGTGTGAATCCCCTGGTGATTGCCACCCAGGC CTCCACCAGCCGCACCTTCAGCCTTGCCATGGGTGTTGCCCAAGAACAGAAGTTGCTGCAAGACGGCGATCTGGTGATCC AAACCGCTGGAACTCTGGCCGGCGTCAGTGGATCCACCGATCTGGTCAAGGTGGGCATCGTTTCAGCCGTGCTTGGACGG GGCACAGGTTTTGGCAGCCAACCGGTGAGCGGCCAGGTGTGCATTGCCAATTCACCCCAGGAAGCCGCCCGCATCGAAGC CGGCGAGATCTTGGTGGTGCCGCACACCGATGCGAACTACCTCGAAGCCATTCGCCGCTGCGGGGGGGTGATCGCTGAAG AAGATGGCAGCCAAAGCCATGCCGCTGTGATCGGCCAGCGTCTCGGGATCCCAGTCATCACAGGGGTGGCCAATGCCACC CGCGACGTGCGCCAAGGAGAGGTGGTTACCCTCGATGTCCGCTACGGGATGGTGCACCGCGGCACCCACGTCCATGACCA CAGCAGCGCCGACACGATCGGTTGA
Upstream 100 bases:
>100_bases GATCGGGGTACAGGGCTGTGTTGCGCGCTTGCCGCTGATAATTGTTGAGATCCATTGGAACGTTCGGGTGGTAGCTTCCG CAACGCTTCAGGCCCGGTCC
Downstream 100 bases:
>100_bases ATCCGCCGCGGTGGTCGTTGCCCGACTACCGCTCCGTGAAACCGTCGGAATGGCCCTGGGCGCGCTTGGGGCCAACCGCT TGCGCTCTCTGCTGACGATG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 2 [H]
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MPLPDHQRRTKIVATIGPATESPDSIRQLILAGATTFRLNFSHGDHEEHAQRAATIRQVAHELGVHVGILQDLQGPKIRL GRFADGPITVAKGDSFALTARDVPCTQSIATVTYDKLASEVEPGSRILLDDGKVEMKVDWIDQAEQTLHCKITVGGKLSN NKGVNFPDCLLSVRALTAKDRNDLAFGLQLGVDWVALSFVRNPSDMQEIKELISSLGHATPVVAKIEKFEAIDQIDAILP LCDGVMVARGDLGVEMAAEEVPLLQKELIRKANSMGIPIITATQMLDSMVANARPTRAEVSDVANAILDGTDAVMLSNET AVGDYAVEAVETMDRIARRIEKDYPNRQPDTQLACTIPNAISMAVSTIATQLDAAAILTLTKSGATGRTVSKFRPSTPIL AITSDVKVARQLQLVWGVNPLVIATQASTSRTFSLAMGVAQEQKLLQDGDLVIQTAGTLAGVSGSTDLVKVGIVSAVLGR GTGFGSQPVSGQVCIANSPQEAARIEAGEILVVPHTDANYLEAIRRCGGVIAEEDGSQSHAAVIGQRLGIPVITGVANAT RDVRQGEVVTLDVRYGMVHRGTHVHDHSSADTIG
Sequences:
>Translated_594_residues MPLPDHQRRTKIVATIGPATESPDSIRQLILAGATTFRLNFSHGDHEEHAQRAATIRQVAHELGVHVGILQDLQGPKIRL GRFADGPITVAKGDSFALTARDVPCTQSIATVTYDKLASEVEPGSRILLDDGKVEMKVDWIDQAEQTLHCKITVGGKLSN NKGVNFPDCLLSVRALTAKDRNDLAFGLQLGVDWVALSFVRNPSDMQEIKELISSLGHATPVVAKIEKFEAIDQIDAILP LCDGVMVARGDLGVEMAAEEVPLLQKELIRKANSMGIPIITATQMLDSMVANARPTRAEVSDVANAILDGTDAVMLSNET AVGDYAVEAVETMDRIARRIEKDYPNRQPDTQLACTIPNAISMAVSTIATQLDAAAILTLTKSGATGRTVSKFRPSTPIL AITSDVKVARQLQLVWGVNPLVIATQASTSRTFSLAMGVAQEQKLLQDGDLVIQTAGTLAGVSGSTDLVKVGIVSAVLGR GTGFGSQPVSGQVCIANSPQEAARIEAGEILVVPHTDANYLEAIRRCGGVIAEEDGSQSHAAVIGQRLGIPVITGVANAT RDVRQGEVVTLDVRYGMVHRGTHVHDHSSADTIG >Mature_593_residues PLPDHQRRTKIVATIGPATESPDSIRQLILAGATTFRLNFSHGDHEEHAQRAATIRQVAHELGVHVGILQDLQGPKIRLG RFADGPITVAKGDSFALTARDVPCTQSIATVTYDKLASEVEPGSRILLDDGKVEMKVDWIDQAEQTLHCKITVGGKLSNN KGVNFPDCLLSVRALTAKDRNDLAFGLQLGVDWVALSFVRNPSDMQEIKELISSLGHATPVVAKIEKFEAIDQIDAILPL CDGVMVARGDLGVEMAAEEVPLLQKELIRKANSMGIPIITATQMLDSMVANARPTRAEVSDVANAILDGTDAVMLSNETA VGDYAVEAVETMDRIARRIEKDYPNRQPDTQLACTIPNAISMAVSTIATQLDAAAILTLTKSGATGRTVSKFRPSTPILA ITSDVKVARQLQLVWGVNPLVIATQASTSRTFSLAMGVAQEQKLLQDGDLVIQTAGTLAGVSGSTDLVKVGIVSAVLGRG TGFGSQPVSGQVCIANSPQEAARIEAGEILVVPHTDANYLEAIRRCGGVIAEEDGSQSHAAVIGQRLGIPVITGVANATR DVRQGEVVTLDVRYGMVHRGTHVHDHSSADTIG
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=492, Percent_Identity=36.1788617886179, Blast_Score=302, Evalue=7e-82, Organism=Homo sapiens, GI33286420, Length=492, Percent_Identity=36.1788617886179, Blast_Score=302, Evalue=7e-82, Organism=Homo sapiens, GI33286418, Length=492, Percent_Identity=36.1788617886179, Blast_Score=298, Evalue=1e-80, Organism=Homo sapiens, GI32967597, Length=492, Percent_Identity=37.3983739837398, Blast_Score=297, Evalue=2e-80, Organism=Homo sapiens, GI10835121, Length=492, Percent_Identity=37.3983739837398, Blast_Score=297, Evalue=2e-80, Organism=Homo sapiens, GI310128732, Length=293, Percent_Identity=35.4948805460751, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI310128730, Length=293, Percent_Identity=35.4948805460751, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI310128736, Length=241, Percent_Identity=31.5352697095436, Blast_Score=133, Evalue=6e-31, Organism=Homo sapiens, GI310128734, Length=241, Percent_Identity=31.5352697095436, Blast_Score=133, Evalue=6e-31, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=30.5555555555556, Blast_Score=112, Evalue=9e-25, Organism=Escherichia coli, GI1787965, Length=472, Percent_Identity=40.8898305084746, Blast_Score=328, Evalue=5e-91, Organism=Escherichia coli, GI1788160, Length=474, Percent_Identity=40.9282700421941, Blast_Score=319, Evalue=3e-88, Organism=Caenorhabditis elegans, GI17544584, Length=431, Percent_Identity=40.6032482598608, Blast_Score=310, Evalue=1e-84, Organism=Caenorhabditis elegans, GI71984413, Length=489, Percent_Identity=38.4458077709611, Blast_Score=287, Evalue=1e-77, Organism=Caenorhabditis elegans, GI17506829, Length=489, Percent_Identity=38.4458077709611, Blast_Score=287, Evalue=1e-77, Organism=Caenorhabditis elegans, GI71984406, Length=489, Percent_Identity=38.4458077709611, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17506831, Length=489, Percent_Identity=38.4458077709611, Blast_Score=286, Evalue=2e-77, Organism=Saccharomyces cerevisiae, GI6319279, Length=488, Percent_Identity=38.5245901639344, Blast_Score=281, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6324923, Length=487, Percent_Identity=37.1663244353183, Blast_Score=279, Evalue=1e-75, Organism=Drosophila melanogaster, GI24648964, Length=493, Percent_Identity=36.5111561866126, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI28571814, Length=493, Percent_Identity=36.5111561866126, Blast_Score=296, Evalue=3e-80, Organism=Drosophila melanogaster, GI24648966, Length=424, Percent_Identity=36.7924528301887, Blast_Score=256, Evalue=4e-68, Organism=Drosophila melanogaster, GI24581235, Length=488, Percent_Identity=31.7622950819672, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI24646914, Length=314, Percent_Identity=36.3057324840764, Blast_Score=174, Evalue=2e-43,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 63179; Mature: 63048
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPDHQRRTKIVATIGPATESPDSIRQLILAGATTFRLNFSHGDHEEHAQRAATIRQVA CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHH HELGVHVGILQDLQGPKIRLGRFADGPITVAKGDSFALTARDVPCTQSIATVTYDKLASE HHHCCEEEHHHHCCCCCEEECEECCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHH VEPGSRILLDDGKVEMKVDWIDQAEQTLHCKITVGGKLSNNKGVNFPDCLLSVRALTAKD CCCCCEEEEECCCEEEEEEECCCCCCEEEEEEEECCEECCCCCCCCHHHHHHHHHHHCCC RNDLAFGLQLGVDWVALSFVRNPSDMQEIKELISSLGHATPVVAKIEKFEAIDQIDAILP CCCEEEEEHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LCDGVMVARGDLGVEMAAEEVPLLQKELIRKANSMGIPIITATQMLDSMVANARPTRAEV HHCCEEEECCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCHHHH SDVANAILDGTDAVMLSNETAVGDYAVEAVETMDRIARRIEKDYPNRQPDTQLACTIPNA HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHH ISMAVSTIATQLDAAAILTLTKSGATGRTVSKFRPSTPILAITSDVKVARQLQLVWGVNP HHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHCCCCCCEEEEECCHHHHHHHHHHCCCCC LVIATQASTSRTFSLAMGVAQEQKLLQDGDLVIQTAGTLAGVSGSTDLVKVGIVSAVLGR EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHC GTGFGSQPVSGQVCIANSPQEAARIEAGEILVVPHTDANYLEAIRRCGGVIAEEDGSQSH CCCCCCCCCCCEEEECCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCEEECCCCCCHH AAVIGQRLGIPVITGVANATRDVRQGEVVTLDVRYGMVHRGTHVHDHSSADTIG HHHHHHHCCCCCEECCHHHHHHHCCCCEEEEEEEECEEECCCCCCCCCCCCCCC >Mature Secondary Structure PLPDHQRRTKIVATIGPATESPDSIRQLILAGATTFRLNFSHGDHEEHAQRAATIRQVA CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHH HELGVHVGILQDLQGPKIRLGRFADGPITVAKGDSFALTARDVPCTQSIATVTYDKLASE HHHCCEEEHHHHCCCCCEEECEECCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHH VEPGSRILLDDGKVEMKVDWIDQAEQTLHCKITVGGKLSNNKGVNFPDCLLSVRALTAKD CCCCCEEEEECCCEEEEEEECCCCCCEEEEEEEECCEECCCCCCCCHHHHHHHHHHHCCC RNDLAFGLQLGVDWVALSFVRNPSDMQEIKELISSLGHATPVVAKIEKFEAIDQIDAILP CCCEEEEEHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LCDGVMVARGDLGVEMAAEEVPLLQKELIRKANSMGIPIITATQMLDSMVANARPTRAEV HHCCEEEECCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCHHHH SDVANAILDGTDAVMLSNETAVGDYAVEAVETMDRIARRIEKDYPNRQPDTQLACTIPNA HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHH ISMAVSTIATQLDAAAILTLTKSGATGRTVSKFRPSTPILAITSDVKVARQLQLVWGVNP HHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHCCCCCCEEEEECCHHHHHHHHHHCCCCC LVIATQASTSRTFSLAMGVAQEQKLLQDGDLVIQTAGTLAGVSGSTDLVKVGIVSAVLGR EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHC GTGFGSQPVSGQVCIANSPQEAARIEAGEILVVPHTDANYLEAIRRCGGVIAEEDGSQSH CCCCCCCCCCCEEEECCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCEEECCCCCCHH AAVIGQRLGIPVITGVANATRDVRQGEVVTLDVRYGMVHRGTHVHDHSSADTIG HHHHHHHCCCCCEECCHHHHHHHCCCCEEEEEEEECEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]