| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is bcp [H]
Identifier: 148242483
GI number: 148242483
Start: 1233130
End: 1233675
Strand: Direct
Name: bcp [H]
Synonym: SynRCC307_1384
Alternate gene names: 148242483
Gene position: 1233130-1233675 (Clockwise)
Preceding gene: 148242482
Following gene: 148242485
Centisome position: 55.42
GC content: 60.81
Gene sequence:
>546_bases ATGCGGCGTCAAGAGGTTCTCAAACTGCTCGGGGCTCTCCCCCTATTGGCCTTGCGGCCCAGGCCTGCCGCAGCGATGGG CGGGACTTTGCCGGCGCTCGATCAACTCGCTCCTGATTTCGATCTCGAATCAGCGGGCCAAACTGGGGCACTTGGGCAGC GTCTGCAGCGCGATGACTTTCGCGGCAGCTGGCTCGTTCTCTATTTCTATCCCCGCGATTTCACCAGCGGATGCACCCTG GAAGCCCGTGGCTTTCAGCGCGACTTGAGCCTCTACAAAGCCGCTAACGGTGCTGTGGTGGGCGTGAGCGCGGATGGCAG CGACAAACACGCCAGCTTTTGCACCAGCGAAGGGCTCGACTTCCCGCTGTTATCCGATCCAGGCGGCGAGGTGAGCAAGC TCTATGGCTCGTGGATTCCCCCCTTCAGCCAACGGCACACCTTTGTGATCGACCCAGACGGCGTCCTGCGCGCCCGCTTT GTTGGTGTGAATCCCTCGATTCACAGCCAAGAAGTGCTCAGCACGCTCAAGGAGTTGCAGGTTTAA
Upstream 100 bases:
>100_bases ATCCAGAAAAAAGGCTTGGGCGCTTACGCCAAAGAGCTGGGCATCAACCTCGCCAAGATCTGAGCGCGCTGCCTAGCTTG GCGGTCGCTTTACAGCTGTG
Downstream 100 bases:
>100_bases GCAGCCCTTGGTGCTGCGCAGCCGACTGGACCTGAGCGGCGATGGCGGCACTGGGCAGGGGCTGATCGAGCTGTTGCTGC CAACTGCTTGTCAGCGCATC
Product: peroxiredoxin
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRRQEVLKLLGALPLLALRPRPAAAMGGTLPALDQLAPDFDLESAGQTGALGQRLQRDDFRGSWLVLYFYPRDFTSGCTL EARGFQRDLSLYKAANGAVVGVSADGSDKHASFCTSEGLDFPLLSDPGGEVSKLYGSWIPPFSQRHTFVIDPDGVLRARF VGVNPSIHSQEVLSTLKELQV
Sequences:
>Translated_181_residues MRRQEVLKLLGALPLLALRPRPAAAMGGTLPALDQLAPDFDLESAGQTGALGQRLQRDDFRGSWLVLYFYPRDFTSGCTL EARGFQRDLSLYKAANGAVVGVSADGSDKHASFCTSEGLDFPLLSDPGGEVSKLYGSWIPPFSQRHTFVIDPDGVLRARF VGVNPSIHSQEVLSTLKELQV >Mature_181_residues MRRQEVLKLLGALPLLALRPRPAAAMGGTLPALDQLAPDFDLESAGQTGALGQRLQRDDFRGSWLVLYFYPRDFTSGCTL EARGFQRDLSLYKAANGAVVGVSADGSDKHASFCTSEGLDFPLLSDPGGEVSKLYGSWIPPFSQRHTFVIDPDGVLRARF VGVNPSIHSQEVLSTLKELQV
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI5802974, Length=160, Percent_Identity=31.875, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1788825, Length=151, Percent_Identity=33.112582781457, Blast_Score=80, Evalue=5e-17, Organism=Drosophila melanogaster, GI17738015, Length=158, Percent_Identity=34.1772151898734, Blast_Score=81, Evalue=3e-16,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 19663; Mature: 19663
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRQEVLKLLGALPLLALRPRPAAAMGGTLPALDQLAPDFDLESAGQTGALGQRLQRDDF CCHHHHHHHHHHHHHEEECCCCCHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC RGSWLVLYFYPRDFTSGCTLEARGFQRDLSLYKAANGAVVGVSADGSDKHASFCTSEGLD CCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCC FPLLSDPGGEVSKLYGSWIPPFSQRHTFVIDPDGVLRARFVGVNPSIHSQEVLSTLKELQ CCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHC V C >Mature Secondary Structure MRRQEVLKLLGALPLLALRPRPAAAMGGTLPALDQLAPDFDLESAGQTGALGQRLQRDDF CCHHHHHHHHHHHHHEEECCCCCHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC RGSWLVLYFYPRDFTSGCTLEARGFQRDLSLYKAANGAVVGVSADGSDKHASFCTSEGLD CCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCC FPLLSDPGGEVSKLYGSWIPPFSQRHTFVIDPDGVLRARFVGVNPSIHSQEVLSTLKELQ CCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]