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The map label for this gene is ugpA [C]

Identifier: 148242474

GI number: 148242474

Start: 1222408

End: 1223262

Strand: Direct

Name: ugpA [C]

Synonym: SynRCC307_1375

Alternate gene names: 148242474

Gene position: 1222408-1223262 (Clockwise)

Preceding gene: 148242473

Following gene: 148242475

Centisome position: 54.94

GC content: 62.57

Gene sequence:

>855_bases
ATGGCACCGGCGTTGCTGCTGCTTTTAGCGGTCTTCGCCCTACCGATGCTGCAGTACGCCTGGCTCAGCACCCAGGCCCA
AACGGTGCTCACCGAGCTCGAGCCCCAACCAGTTGGGTTGGCCCAGTGGCAGCGTCTGCTTCAGGACGGGCGCTTCTGGC
AAGACGCCTTCCAAACCTTGCGGTTCGGCCTCTGCTCTGTGGGGTTGGAGTTGGTGCTGGGTTTGGCCGTCGCCCTGCTC
TTGAATCAGCCGCTGCGGGGCCGAACGCTGCTGCGCACCGTGAGCCTGCTGCCTTGGGCCCTGCCCACCACGGTGATGGC
GTTGGGCTGGCGCTGGATCTTCAATGATCCCTTTGGCCCGATCAATCTGCTGCTGGCTCAGGTGGGTCTTCCCACCGTGT
CGTTTTTGGGTGATCCCGCCATCACCTGGCTGAGCATGGTGTGGGCAGACACCTGGAAGACCACTCCCTTTGTGGCCCTG
CTGCTGTTGGCTGGCCTGCAAACCATCCCAGCGGATCTCTATGAAGCGGCGGCTTTAGAGGGTGCCAATCGCTGGCAGAG
CTTGCGGCGGATCACCTTGCCGTTGCTCTCCCCCTACATCTTGATTGCAGTCTTGTTTCGTTTAGCCCAGGCCCTGGGGG
TGTTTGACCTGGTGCAGGTGCTCACGGCAGGCGGCCCGGCAGGCAGCACCGAGAGCTTGGCGCTCTACGCCTACATCAAT
GCCATGCGCTTTCTCGATTTCGGCTACAGCGCGACGCTGATGCTGGCGGCGTTCCTACTGATGCTGCTGCTCAGTGGTGG
AGCAGTGCTGCTATGGCTAGTCAGCCGGCCGCGTTGGGCAGGAGGGCAACGATGA

Upstream 100 bases:

>100_bases
TGAGCCCGCAGCAGGGAATGGAGCAATTGCAGGAGCAAACGCTGCAGCTGCGCCGAACCGTGGGAGGTGAGATTTGAGAG
GCCAACGGCTGTGGCTGCTG

Downstream 100 bases:

>100_bases
ACAGGTTGCTGCTGATTCTCTGGAGCCTCGGTCCGATGCTCTGGCAGCTCTACACATCCTTTCGGCCCAATGCCACGCTC
ACCGGCAATCCCATGCAAGG

Product: ABC-type sugar transport system, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MAPALLLLLAVFALPMLQYAWLSTQAQTVLTELEPQPVGLAQWQRLLQDGRFWQDAFQTLRFGLCSVGLELVLGLAVALL
LNQPLRGRTLLRTVSLLPWALPTTVMALGWRWIFNDPFGPINLLLAQVGLPTVSFLGDPAITWLSMVWADTWKTTPFVAL
LLLAGLQTIPADLYEAAALEGANRWQSLRRITLPLLSPYILIAVLFRLAQALGVFDLVQVLTAGGPAGSTESLALYAYIN
AMRFLDFGYSATLMLAAFLLMLLLSGGAVLLWLVSRPRWAGGQR

Sequences:

>Translated_284_residues
MAPALLLLLAVFALPMLQYAWLSTQAQTVLTELEPQPVGLAQWQRLLQDGRFWQDAFQTLRFGLCSVGLELVLGLAVALL
LNQPLRGRTLLRTVSLLPWALPTTVMALGWRWIFNDPFGPINLLLAQVGLPTVSFLGDPAITWLSMVWADTWKTTPFVAL
LLLAGLQTIPADLYEAAALEGANRWQSLRRITLPLLSPYILIAVLFRLAQALGVFDLVQVLTAGGPAGSTESLALYAYIN
AMRFLDFGYSATLMLAAFLLMLLLSGGAVLLWLVSRPRWAGGQR
>Mature_283_residues
APALLLLLAVFALPMLQYAWLSTQAQTVLTELEPQPVGLAQWQRLLQDGRFWQDAFQTLRFGLCSVGLELVLGLAVALLL
NQPLRGRTLLRTVSLLPWALPTTVMALGWRWIFNDPFGPINLLLAQVGLPTVSFLGDPAITWLSMVWADTWKTTPFVALL
LLAGLQTIPADLYEAAALEGANRWQSLRRITLPLLSPYILIAVLFRLAQALGVFDLVQVLTAGGPAGSTESLALYAYINA
MRFLDFGYSATLMLAAFLLMLLLSGGAVLLWLVSRPRWAGGQR

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=234, Percent_Identity=29.9145299145299, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1790465, Length=215, Percent_Identity=33.0232558139535, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1789861, Length=266, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1788764, Length=191, Percent_Identity=31.9371727748691, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31201; Mature: 31069

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPALLLLLAVFALPMLQYAWLSTQAQTVLTELEPQPVGLAQWQRLLQDGRFWQDAFQTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHH
RFGLCSVGLELVLGLAVALLLNQPLRGRTLLRTVSLLPWALPTTVMALGWRWIFNDPFGP
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH
INLLLAQVGLPTVSFLGDPAITWLSMVWADTWKTTPFVALLLLAGLQTIPADLYEAAALE
HHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GANRWQSLRRITLPLLSPYILIAVLFRLAQALGVFDLVQVLTAGGPAGSTESLALYAYIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AMRFLDFGYSATLMLAAFLLMLLLSGGAVLLWLVSRPRWAGGQR
HHHHHHCCHHHHHHHHHHHHHHHHHCCHHEEHHHCCCCCCCCCC
>Mature Secondary Structure 
APALLLLLAVFALPMLQYAWLSTQAQTVLTELEPQPVGLAQWQRLLQDGRFWQDAFQTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHH
RFGLCSVGLELVLGLAVALLLNQPLRGRTLLRTVSLLPWALPTTVMALGWRWIFNDPFGP
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH
INLLLAQVGLPTVSFLGDPAITWLSMVWADTWKTTPFVALLLLAGLQTIPADLYEAAALE
HHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GANRWQSLRRITLPLLSPYILIAVLFRLAQALGVFDLVQVLTAGGPAGSTESLALYAYIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AMRFLDFGYSATLMLAAFLLMLLLSGGAVLLWLVSRPRWAGGQR
HHHHHHCCHHHHHHHHHHHHHHHHHCCHHEEHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]