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The map label for this gene is pqqL [C]

Identifier: 148242384

GI number: 148242384

Start: 1139588

End: 1140844

Strand: Direct

Name: pqqL [C]

Synonym: SynRCC307_1285

Alternate gene names: 148242384

Gene position: 1139588-1140844 (Clockwise)

Preceding gene: 148242368

Following gene: 148242385

Centisome position: 51.22

GC content: 61.02

Gene sequence:

>1257_bases
TTGGAACAGCCCGCAGGGCTTGGCTACAGCACCCCACACACCACCGCGCTGAGCAACGGTTTGCCGTTGAGCCTGCTGCC
GGTGCCCGATTCACCCGTGGCCTGTCTTCAGTTCTGGTGCAGCGCCGGCAGTGCGGTTGAGCAGGCCCAGGAGCACGGCA
TGGCCCATTTCCTGGAACACATGGTGTTCAAAGGCAATGAAAAACTCCCGGCTGGAGCCTTTGATTGGCAGGTGGAAGCC
AGTGGCGGAATCAGCAATGCCGCCACCGGCTTTGATGACGTCCATTATCACGTGTTGATGCCCAAAGAGGCCTTGCCTTT
GGCCTGTGAGTTGTTGCCGCGACTGGTGCTGCAGCCCGAAATCAGGGCTGAGGATTTTGTCCTCGAACGCCAGGTGGTGC
TCGAGGAGTTGGCCCAAAGCGAAGATCAACCCGAGGAGCAAGCCTTCCAGCAGCTCCTGGCCTTGGCCTGCGGTGAGCAT
GCCTATGGCAGGCCAATCCTGGGAGTTCGCGAGCAATTGCTGCAGCAAACACCTCAGCAGATGTTGGCCTTTCAACAGCG
TCATTACCGCGCGCAGACCTGTGCTGTGAGCCTCAGTGGTGGTTTTGACCTGGGCCATGTTCAGCAACTACTCGAGGCCA
GCCCCTTCGCCGAGCTCCCAGGCACCACTGGGATCGATCCACAGCAGCCAGGGCTGAAGGTTCAACCGGGCGTGCATGCG
CTGGAGCTTCCACGGCTCGAGTCGGCCCGGCTGTTGATGCTGTGGTCGGCACCGCCGGCGAAGGAAATGTTGGCCTTAAG
CGGCACCGATCTGCTCACCACCGTTCTGGCCGAGGGGCGCAGCAGCCGCCTGGTGCGCTGCCTGCGTGAAGAGAAGCAAG
TGGTCGAATCCATCGATATGGATGTGCATGCCTTGGAGCAGGGCAGCTTGGTGATCCTCGAAGCGATCTGCCCAAGTGAC
CGGCTGGGCGAGGTGCATCAAAACGTCTGCGCGATCTTGCGTCAACTGCAGCAGCAAGTCCCCAGCGCCACAGAGCTCAA
GCGTGCGAAACGCCTGCTCGACCATGGGCACCGTTTTGCCATGGAGGGGATTGGCTCACTGGCCCAACACTTGGGGCAAG
CCACCTTGATGAAGCGATTGGAACCCCTCGAAGAGCCCCTGTCGCGCTGGCACCAATGGCAAGCGGAGGATCTTCAGCAG
CTCTCCCGCGATCTCGATCCAGATCTGGCCTGCACCCTGCTGGTGAGGCCGAAGTGA

Upstream 100 bases:

>100_bases
AAAGCGCGCAAGCAGGCGGCCAACGGAGCAGCCCAACACCCTAAATGGCGCAGACCCAAGGCTGGATCGCCATAGTGAGG
AGATCAGCTGCCTTGATGCG

Downstream 100 bases:

>100_bases
GCACAAGGCTGCAATGGCTTGAGCCCAGCTTCGGCGATGTGATGGCGGCTCGCTTGGTGCTGCCGCTGGGCAGTGCTGCT
GATCCACCGGGCCAAGCCGG

Product: Zn-dependent peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MEQPAGLGYSTPHTTALSNGLPLSLLPVPDSPVACLQFWCSAGSAVEQAQEHGMAHFLEHMVFKGNEKLPAGAFDWQVEA
SGGISNAATGFDDVHYHVLMPKEALPLACELLPRLVLQPEIRAEDFVLERQVVLEELAQSEDQPEEQAFQQLLALACGEH
AYGRPILGVREQLLQQTPQQMLAFQQRHYRAQTCAVSLSGGFDLGHVQQLLEASPFAELPGTTGIDPQQPGLKVQPGVHA
LELPRLESARLLMLWSAPPAKEMLALSGTDLLTTVLAEGRSSRLVRCLREEKQVVESIDMDVHALEQGSLVILEAICPSD
RLGEVHQNVCAILRQLQQQVPSATELKRAKRLLDHGHRFAMEGIGSLAQHLGQATLMKRLEPLEEPLSRWHQWQAEDLQQ
LSRDLDPDLACTLLVRPK

Sequences:

>Translated_418_residues
MEQPAGLGYSTPHTTALSNGLPLSLLPVPDSPVACLQFWCSAGSAVEQAQEHGMAHFLEHMVFKGNEKLPAGAFDWQVEA
SGGISNAATGFDDVHYHVLMPKEALPLACELLPRLVLQPEIRAEDFVLERQVVLEELAQSEDQPEEQAFQQLLALACGEH
AYGRPILGVREQLLQQTPQQMLAFQQRHYRAQTCAVSLSGGFDLGHVQQLLEASPFAELPGTTGIDPQQPGLKVQPGVHA
LELPRLESARLLMLWSAPPAKEMLALSGTDLLTTVLAEGRSSRLVRCLREEKQVVESIDMDVHALEQGSLVILEAICPSD
RLGEVHQNVCAILRQLQQQVPSATELKRAKRLLDHGHRFAMEGIGSLAQHLGQATLMKRLEPLEEPLSRWHQWQAEDLQQ
LSRDLDPDLACTLLVRPK
>Mature_418_residues
MEQPAGLGYSTPHTTALSNGLPLSLLPVPDSPVACLQFWCSAGSAVEQAQEHGMAHFLEHMVFKGNEKLPAGAFDWQVEA
SGGISNAATGFDDVHYHVLMPKEALPLACELLPRLVLQPEIRAEDFVLERQVVLEELAQSEDQPEEQAFQQLLALACGEH
AYGRPILGVREQLLQQTPQQMLAFQQRHYRAQTCAVSLSGGFDLGHVQQLLEASPFAELPGTTGIDPQQPGLKVQPGVHA
LELPRLESARLLMLWSAPPAKEMLALSGTDLLTTVLAEGRSSRLVRCLREEKQVVESIDMDVHALEQGSLVILEAICPSD
RLGEVHQNVCAILRQLQQQVPSATELKRAKRLLDHGHRFAMEGIGSLAQHLGQATLMKRLEPLEEPLSRWHQWQAEDLQQ
LSRDLDPDLACTLLVRPK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=210, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI46593007, Length=181, Percent_Identity=26.5193370165746, Blast_Score=77, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71999683, Length=217, Percent_Identity=25.8064516129032, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17553678, Length=187, Percent_Identity=26.7379679144385, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6323192, Length=211, Percent_Identity=24.1706161137441, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21357875, Length=199, Percent_Identity=28.1407035175879, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24646943, Length=199, Percent_Identity=28.1407035175879, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24641429, Length=303, Percent_Identity=24.0924092409241, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24667786, Length=163, Percent_Identity=30.0613496932515, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR001431
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 46104; Mature: 46104

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQPAGLGYSTPHTTALSNGLPLSLLPVPDSPVACLQFWCSAGSAVEQAQEHGMAHFLEH
CCCCCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
MVFKGNEKLPAGAFDWQVEASGGISNAATGFDDVHYHVLMPKEALPLACELLPRLVLQPE
HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCC
IRAEDFVLERQVVLEELAQSEDQPEEQAFQQLLALACGEHAYGRPILGVREQLLQQTPQQ
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHH
MLAFQQRHYRAQTCAVSLSGGFDLGHVQQLLEASPFAELPGTTGIDPQQPGLKVQPGVHA
HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCH
LELPRLESARLLMLWSAPPAKEMLALSGTDLLTTVLAEGRSSRLVRCLREEKQVVESIDM
HCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
DVHALEQGSLVILEAICPSDRLGEVHQNVCAILRQLQQQVPSATELKRAKRLLDHGHRFA
CHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MEGIGSLAQHLGQATLMKRLEPLEEPLSRWHQWQAEDLQQLSRDLDPDLACTLLVRPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MEQPAGLGYSTPHTTALSNGLPLSLLPVPDSPVACLQFWCSAGSAVEQAQEHGMAHFLEH
CCCCCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
MVFKGNEKLPAGAFDWQVEASGGISNAATGFDDVHYHVLMPKEALPLACELLPRLVLQPE
HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCC
IRAEDFVLERQVVLEELAQSEDQPEEQAFQQLLALACGEHAYGRPILGVREQLLQQTPQQ
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHH
MLAFQQRHYRAQTCAVSLSGGFDLGHVQQLLEASPFAELPGTTGIDPQQPGLKVQPGVHA
HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCH
LELPRLESARLLMLWSAPPAKEMLALSGTDLLTTVLAEGRSSRLVRCLREEKQVVESIDM
HCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
DVHALEQGSLVILEAICPSDRLGEVHQNVCAILRQLQQQVPSATELKRAKRLLDHGHRFA
CHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MEGIGSLAQHLGQATLMKRLEPLEEPLSRWHQWQAEDLQQLSRDLDPDLACTLLVRPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]