| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is rpmG [H]
Identifier: 148242323
GI number: 148242323
Start: 1084922
End: 1085116
Strand: Direct
Name: rpmG [H]
Synonym: SynRCC307_1224
Alternate gene names: 148242323
Gene position: 1084922-1085116 (Clockwise)
Preceding gene: 148242321
Following gene: 148242324
Centisome position: 48.76
GC content: 53.85
Gene sequence:
>195_bases ATGGCCAAAAACAAGGGCGTCCGGATTGTGGTCACTCTCGAGTGCACCGAATGCCGGTCCAACACTGATAAGCGGTCTCA GGGAGTGTCCCGCTACACCACTGAGAAAAACCGCCGCAACACCACAGAACGGCTGGAGATCAAGAAGTTCTGTCCCCACG ACAACAAGATGACGGTCCACAAAGAGATCAAGTGA
Upstream 100 bases:
>100_bases AATCCAGCTGGAAGCGGGCGGATCCTACCGATGAGCGGGAGCCACTCAGTTATGATGGCGGATTGTCACACCGCTCCGCT CAAGCAGCGCACGTCCTTCC
Downstream 100 bases:
>100_bases TCTCACGCTCGTTATCCCACTTCCACTGACTCTCCAATCCCATGCCTCCCTCCTTCTTTAAAAAGCGGCTGTCTCCGATC AAGCCCGGTGATCCGATTGA
Product: 50S ribosomal protein L33
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MAKNKGVRIVVTLECTECRSNTDKRSQGVSRYTTEKNRRNTTERLEIKKFCPHDNKMTVHKEIK
Sequences:
>Translated_64_residues MAKNKGVRIVVTLECTECRSNTDKRSQGVSRYTTEKNRRNTTERLEIKKFCPHDNKMTVHKEIK >Mature_63_residues AKNKGVRIVVTLECTECRSNTDKRSQGVSRYTTEKNRRNTTERLEIKKFCPHDNKMTVHKEIK
Specific function: Unknown
COG id: COG0267
COG function: function code J; Ribosomal protein L33
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L33P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001705 - InterPro: IPR018264 - InterPro: IPR011332 [H]
Pfam domain/function: PF00471 Ribosomal_L33 [H]
EC number: NA
Molecular weight: Translated: 7539; Mature: 7408
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: PS00582 RIBOSOMAL_L33
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNKGVRIVVTLECTECRSNTDKRSQGVSRYTTEKNRRNTTERLEIKKFCPHDNKMTVH CCCCCCCEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCHHEEHHCCCCCCCCEEEE KEIK EECC >Mature Secondary Structure AKNKGVRIVVTLECTECRSNTDKRSQGVSRYTTEKNRRNTTERLEIKKFCPHDNKMTVH CCCCCCEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCHHEEHHCCCCCCCCEEEE KEIK EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA