Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242271

Identifier: 148242271

GI number: 148242271

Start: 1035144

End: 1035788

Strand: Direct

Name: 148242271

Synonym: SynRCC307_1172

Alternate gene names: NA

Gene position: 1035144-1035788 (Clockwise)

Preceding gene: 148242270

Following gene: 148242272

Centisome position: 46.53

GC content: 58.45

Gene sequence:

>645_bases
ATGGCCGTACTGACTGAAGACCAACGCCGCAAGTGGGACGAAAGCAACGACGATCTGTTTTATGCCGAGCCGCGCTTTGT
TCAGCACCTCGATGAGGCGTTTCGTCGCCGCTTAACGCAGCTCTACCGGCAGAGGATCCCCCCCTGTGCGGTGGTGCTGG
ATTTAATGAGCAGTTGGGTCAGTCATCTGCCCGATGAAATCAGCTATCAGACGGTGATCGGCCATGGACTGAACACCGCT
GAATTGGAGGCCAACCCGCGGCTCGATCGCCATTGGCGCCAAAACCTCAACCGTGATCAACAGCTGCCTTTGGAGGATGC
CAGTGTTGATGCCTGCTTGATCGTGGCGGGTTGGCAGTACCTGCAACAGCCCGAGGCGGTGGCCCATGAGCTGTGGCGTG
TGCTTCGGCCCGATTCGCAATTGATCGTGGCCTTCAGCAATCGCATGTTTTTCACCAAGGCGCCCCAGATATGGGCCGAT
GGTTCCGATCGTGATCACCTCAGCTACGTGGCTGAGGTGTTGATGGCCCAAGGCTGGCCGCAACCGGAGTTGATTGCTGA
AGACACGCAGGCCAGCGGTGTGATGGGCTGGATTGGTGGCAAAGGCGATCCCTTTTTCGCGGTCATCGCCACCAAGCCAG
CCTGA

Upstream 100 bases:

>100_bases
GATCAGTGGCAAAGCGCCCGCAGCCTGGGCGACTGGAGCCTGGTGCATTGCACGGTGTCGCCAGGATTTTGTTTTGATGA
CTTCGAGTTGATCGCTGGCG

Downstream 100 bases:

>100_bases
TGCTGGATCCCTCAGAACAACTGCGCTTGCGAGCCAGGCTGCTGGAATTTCTCAAATTTCGGGTCTTGGCCTCCCAAGAG
GCATTTTTTGAGCCGTGGCA

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MAVLTEDQRRKWDESNDDLFYAEPRFVQHLDEAFRRRLTQLYRQRIPPCAVVLDLMSSWVSHLPDEISYQTVIGHGLNTA
ELEANPRLDRHWRQNLNRDQQLPLEDASVDACLIVAGWQYLQQPEAVAHELWRVLRPDSQLIVAFSNRMFFTKAPQIWAD
GSDRDHLSYVAEVLMAQGWPQPELIAEDTQASGVMGWIGGKGDPFFAVIATKPA

Sequences:

>Translated_214_residues
MAVLTEDQRRKWDESNDDLFYAEPRFVQHLDEAFRRRLTQLYRQRIPPCAVVLDLMSSWVSHLPDEISYQTVIGHGLNTA
ELEANPRLDRHWRQNLNRDQQLPLEDASVDACLIVAGWQYLQQPEAVAHELWRVLRPDSQLIVAFSNRMFFTKAPQIWAD
GSDRDHLSYVAEVLMAQGWPQPELIAEDTQASGVMGWIGGKGDPFFAVIATKPA
>Mature_213_residues
AVLTEDQRRKWDESNDDLFYAEPRFVQHLDEAFRRRLTQLYRQRIPPCAVVLDLMSSWVSHLPDEISYQTVIGHGLNTAE
LEANPRLDRHWRQNLNRDQQLPLEDASVDACLIVAGWQYLQQPEAVAHELWRVLRPDSQLIVAFSNRMFFTKAPQIWADG
SDRDHLSYVAEVLMAQGWPQPELIAEDTQASGVMGWIGGKGDPFFAVIATKPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24554; Mature: 24423

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLTEDQRRKWDESNDDLFYAEPRFVQHLDEAFRRRLTQLYRQRIPPCAVVLDLMSSWV
CCCCCCHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SHLPDEISYQTVIGHGLNTAELEANPRLDRHWRQNLNRDQQLPLEDASVDACLIVAGWQY
HHCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECHHH
LQQPEAVAHELWRVLRPDSQLIVAFSNRMFFTKAPQIWADGSDRDHLSYVAEVLMAQGWP
HHCHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCEECCCCCCHHHHHHHHHHHHCCCC
QPELIAEDTQASGVMGWIGGKGDPFFAVIATKPA
CCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure 
AVLTEDQRRKWDESNDDLFYAEPRFVQHLDEAFRRRLTQLYRQRIPPCAVVLDLMSSWV
CCCCCHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SHLPDEISYQTVIGHGLNTAELEANPRLDRHWRQNLNRDQQLPLEDASVDACLIVAGWQY
HHCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECHHH
LQQPEAVAHELWRVLRPDSQLIVAFSNRMFFTKAPQIWADGSDRDHLSYVAEVLMAQGWP
HHCHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCEECCCCCCHHHHHHHHHHHHCCCC
QPELIAEDTQASGVMGWIGGKGDPFFAVIATKPA
CCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA