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The map label for this gene is yqjB [H]

Identifier: 148242242

GI number: 148242242

Start: 1009146

End: 1009730

Strand: Direct

Name: yqjB [H]

Synonym: SynRCC307_1143

Alternate gene names: 148242242

Gene position: 1009146-1009730 (Clockwise)

Preceding gene: 148242241

Following gene: 148242243

Centisome position: 45.36

GC content: 62.22

Gene sequence:

>585_bases
ATGCGGCTCTTTCAACCTCTGCTCCTCTCAGCGCTGATCGCTGCAGCCACCCCGCTGCAGGCCGGCCCCCTCAGTGATCT
CGATCATCCCCTGCGTCCTTTGGAGCTGCAGCTTGCCGAGCTGCCCTCCAATGTGGTCGGTCGCGCAGGACGGCATTTGG
TGCTGCATCGCAGCCGCCGTCAGCTGCTGTTGATCGAGCAGGGGCAGTTAGTGAGCCGCTATCCGGTTGCAGTGGGAATG
GCCGGCTGGGAAACCCCAGCCGGCACCTTCCGGGTGCTCAACAAGGTCAGCGAACCTTCCTGGGCCCATCCCCAAACCGG
GGAGGTGGTCACTGGCGAAGACCCCAAGAATCCGCTGGGTAGCCGCTGGATCGGCTTTTACAAAGACTGTGTTGGCCGCA
AAGGCTTTGACGGCGAGCAAATGCTCGACATCAAAGGCTGCACCACCGTTGGCTTCCACGGAACACCCCACCGCTGGACC
ATCGGCCATGCGGTCTCCCATGGCTGCGTGCGGCTCTTTGATGAGGACATCCGCGATTTGTTTGACCGTGTGCGCACCGG
CACTCCCGTAACGGTTCTGCCTTGA

Upstream 100 bases:

>100_bases
GCGGCAAGCAACGGTTGCGTTCGAATGTTTGACCGCGATGCCGTGGCTCTCTATGACCTGGTGAAGGAAGGCACTCGCGT
CCGCGTTATCGACTGAAGTC

Downstream 100 bases:

>100_bases
TTACTTCGTAAAGTCCCCCGCACATGGCGGGACTTTGATGCGCATCCTCTTTGCTGCGGCCGAATGCGCACCGATGGTGA
AAGTCGGCGGCATGGGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MRLFQPLLLSALIAAATPLQAGPLSDLDHPLRPLELQLAELPSNVVGRAGRHLVLHRSRRQLLLIEQGQLVSRYPVAVGM
AGWETPAGTFRVLNKVSEPSWAHPQTGEVVTGEDPKNPLGSRWIGFYKDCVGRKGFDGEQMLDIKGCTTVGFHGTPHRWT
IGHAVSHGCVRLFDEDIRDLFDRVRTGTPVTVLP

Sequences:

>Translated_194_residues
MRLFQPLLLSALIAAATPLQAGPLSDLDHPLRPLELQLAELPSNVVGRAGRHLVLHRSRRQLLLIEQGQLVSRYPVAVGM
AGWETPAGTFRVLNKVSEPSWAHPQTGEVVTGEDPKNPLGSRWIGFYKDCVGRKGFDGEQMLDIKGCTTVGFHGTPHRWT
IGHAVSHGCVRLFDEDIRDLFDRVRTGTPVTVLP
>Mature_194_residues
MRLFQPLLLSALIAAATPLQAGPLSDLDHPLRPLELQLAELPSNVVGRAGRHLVLHRSRRQLLLIEQGQLVSRYPVAVGM
AGWETPAGTFRVLNKVSEPSWAHPQTGEVVTGEDPKNPLGSRWIGFYKDCVGRKGFDGEQMLDIKGCTTVGFHGTPHRWT
IGHAVSHGCVRLFDEDIRDLFDRVRTGTPVTVLP

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=137, Percent_Identity=32.1167883211679, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 21381; Mature: 21381

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFQPLLLSALIAAATPLQAGPLSDLDHPLRPLELQLAELPSNVVGRAGRHLVLHRSRR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCEEEEECCCC
QLLLIEQGQLVSRYPVAVGMAGWETPAGTFRVLNKVSEPSWAHPQTGEVVTGEDPKNPLG
EEEEEECCCCHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCH
SRWIGFYKDCVGRKGFDGEQMLDIKGCTTVGFHGTPHRWTIGHAVSHGCVRLFDEDIRDL
HHHHHHHHHHHCCCCCCCCEEEEECCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
FDRVRTGTPVTVLP
HHHHHCCCCEEECC
>Mature Secondary Structure
MRLFQPLLLSALIAAATPLQAGPLSDLDHPLRPLELQLAELPSNVVGRAGRHLVLHRSRR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCEEEEECCCC
QLLLIEQGQLVSRYPVAVGMAGWETPAGTFRVLNKVSEPSWAHPQTGEVVTGEDPKNPLG
EEEEEECCCCHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCH
SRWIGFYKDCVGRKGFDGEQMLDIKGCTTVGFHGTPHRWTIGHAVSHGCVRLFDEDIRDL
HHHHHHHHHHHCCCCCCCCEEEEECCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
FDRVRTGTPVTVLP
HHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]