| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242198
Identifier: 148242198
GI number: 148242198
Start: 973907
End: 974128
Strand: Direct
Name: 148242198
Synonym: SynRCC307_1099
Alternate gene names: NA
Gene position: 973907-974128 (Clockwise)
Preceding gene: 148242197
Following gene: 148242199
Centisome position: 43.77
GC content: 55.86
Gene sequence:
>222_bases ATGGATGAGGCACCACTGCCTTTGCGCCGGCTGATGGTGTCCTGCTTCTTGAGCTTGGAGGACTTAGCGGGATCTTTACC GATCAATCACCAGGCCATTGCCAAAAGGCTGCTGAGCAGCCGTAGACCGGAGAGGTGGATCGGAAGCAAGCAGCCGATTC ACACGACTGATCGGACATCTGACGCTCTGGGGGCTTCCAGGGCGTTTTTTTTGCCTTGTTGA
Upstream 100 bases:
>100_bases GGACCGCTTAGGACGATTGGCAGCGCCGTCTTGGTATCTGCGAGGCCAGGCCAGCGCCGGGGGTGTTTGACGTGTTGGCC CCCGATCAATCCCCAACGCA
Downstream 100 bases:
>100_bases GGGGCCTGGCCGCCAGCGTGGCGCCACAGGTTTTTCTCCCTACGCTTCAAAAGTGCCTGGGAGATGAGCGCCGATGTTCA GCGGTTTGACCGATCTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MDEAPLPLRRLMVSCFLSLEDLAGSLPINHQAIAKRLLSSRRPERWIGSKQPIHTTDRTSDALGASRAFFLPC
Sequences:
>Translated_73_residues MDEAPLPLRRLMVSCFLSLEDLAGSLPINHQAIAKRLLSSRRPERWIGSKQPIHTTDRTSDALGASRAFFLPC >Mature_73_residues MDEAPLPLRRLMVSCFLSLEDLAGSLPINHQAIAKRLLSSRRPERWIGSKQPIHTTDRTSDALGASRAFFLPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8161; Mature: 8161
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEAPLPLRRLMVSCFLSLEDLAGSLPINHQAIAKRLLSSRRPERWIGSKQPIHTTDRTS CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DALGASRAFFLPC CCCCCCCEECCCC >Mature Secondary Structure MDEAPLPLRRLMVSCFLSLEDLAGSLPINHQAIAKRLLSSRRPERWIGSKQPIHTTDRTS CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DALGASRAFFLPC CCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA