| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242177
Identifier: 148242177
GI number: 148242177
Start: 965087
End: 965524
Strand: Direct
Name: 148242177
Synonym: SynRCC307_1078
Alternate gene names: NA
Gene position: 965087-965524 (Clockwise)
Preceding gene: 148242176
Following gene: 148242181
Centisome position: 43.38
GC content: 56.39
Gene sequence:
>438_bases TTGGTGCCAGCCATGGGAGAGGATGAGCCAAGGCCTGGTGGCTGGATGAAGCTGCTGTTGATCACTGCCCTTGCTCTGCT GAGTGCTGCACCGGCCACGCGAGCCCAGCCTGATCACTTCACCGTTTACAAGCCTTGGGGCCAAGGCGAACCGGTGGCTC GCGATTGGTTTTTGCGCACAGAGCCAAGCGGGATCGTTGTGATCCGATCGGATGTCTTCCCCGATCGTCTCAACGGGCGC AACACCACCTACATCAAAAAGTTCAACTGCAAAACCAAGAAATATCTTGTCCACCAGCGCTATCTGAACGAAGAGCTGCA CTGGACTGAGATTGATTCGGTCTGGACCTGGAAGGACGTGCTGCTGCCTGATGACGCCGACCATCTCCAGTGGGTCTGCA GTTGGTCCAAGCCAGAGGCTGAGACCAATCCAAGTTGA
Upstream 100 bases:
>100_bases CGACAACCTTGGCTCAGGCGTCGCGATTGGCCTGTACTGGATGAGAAGCGGGGCTGTGGCCAATGACTCCCTTGGCTGTG CCATGGCTGGCTGATCAGGC
Downstream 100 bases:
>100_bases GCCTGCTGAGCGCCTGATCGAGCAGGGGCTCAGCCGATACTGCAGCGATTAACGGCGAGGTTGACGGGGCTCGGCTTTGT TGACGCGGATGTAGCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MVPAMGEDEPRPGGWMKLLLITALALLSAAPATRAQPDHFTVYKPWGQGEPVARDWFLRTEPSGIVVIRSDVFPDRLNGR NTTYIKKFNCKTKKYLVHQRYLNEELHWTEIDSVWTWKDVLLPDDADHLQWVCSWSKPEAETNPS
Sequences:
>Translated_145_residues MVPAMGEDEPRPGGWMKLLLITALALLSAAPATRAQPDHFTVYKPWGQGEPVARDWFLRTEPSGIVVIRSDVFPDRLNGR NTTYIKKFNCKTKKYLVHQRYLNEELHWTEIDSVWTWKDVLLPDDADHLQWVCSWSKPEAETNPS >Mature_145_residues MVPAMGEDEPRPGGWMKLLLITALALLSAAPATRAQPDHFTVYKPWGQGEPVARDWFLRTEPSGIVVIRSDVFPDRLNGR NTTYIKKFNCKTKKYLVHQRYLNEELHWTEIDSVWTWKDVLLPDDADHLQWVCSWSKPEAETNPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16734; Mature: 16734
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPAMGEDEPRPGGWMKLLLITALALLSAAPATRAQPDHFTVYKPWGQGEPVARDWFLRT CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEE EPSGIVVIRSDVFPDRLNGRNTTYIKKFNCKTKKYLVHQRYLNEELHWTEIDSVWTWKDV CCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCEEEEEEE LLPDDADHLQWVCSWSKPEAETNPS ECCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MVPAMGEDEPRPGGWMKLLLITALALLSAAPATRAQPDHFTVYKPWGQGEPVARDWFLRT CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEE EPSGIVVIRSDVFPDRLNGRNTTYIKKFNCKTKKYLVHQRYLNEELHWTEIDSVWTWKDV CCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCEEEEEEE LLPDDADHLQWVCSWSKPEAETNPS ECCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA