| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242158
Identifier: 148242158
GI number: 148242158
Start: 956500
End: 956955
Strand: Direct
Name: 148242158
Synonym: SynRCC307_1059
Alternate gene names: NA
Gene position: 956500-956955 (Clockwise)
Preceding gene: 148242157
Following gene: 148242159
Centisome position: 42.99
GC content: 52.85
Gene sequence:
>456_bases TTGAGGGCTTGCGCTGCCGATCTCGATCCATTGATTCGGGGTTTTATGACACTTATCCAGTGCTTCTATGCTGGCAATCT CCACTGCCGAGCCAAGCATCTTCCATCGGCTTCCATCATCAATACTGATGCGCCGCCTGATCATGATGGAAACGGCGAAG GCTTTGCCCCGACAGACCTTCTTGCCAGTTCTTTGGGTACTTGCATCCTCACGGTGATGGGGATCCATTCGCGCCGAAAG GGCTGGGACCTGGGCCGGGCCCATGCATTGGTTCGCAAAACGATGAGCGCAGAGCAACCCAGGAAAATTGAGAGCCTCGA TGTGGATGTTCACTTGCCACCTGGCTTGACTGCTGAGCAAATCGTGTTTTTGAAACAGGCTGCTCAGGATTGTCCGGTGA TGAGGAGTTTGTCAGATGACCTTGTGGTTCATCTCAAATGGATTGTGGAGGTCTAG
Upstream 100 bases:
>100_bases CGCGTCAGGCATCAGCGCTTTCCAGGGCGTCATTGGGAAACCAATGACCTCAATACGGCACGCATGATTTGTGATGAATT GAATTGCGAATAGACCTCAG
Downstream 100 bases:
>100_bases AAGTTTCCCCATCGTTTGTGAAAAGGAGGATGTATGCGTCTGATATTTATTCCAATTCATGTGTTTCGTGAAACACCAGC TGTCACTTTCTTTGATGCCA
Product: redox protein
Products: NA
Alternate protein names: Redox Protein; Stress-Induced Protein OsmC; OsmC/Ohr Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Osmc Family Protein; OsmC-Like Protein; Osmc-Like Protein
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRACAADLDPLIRGFMTLIQCFYAGNLHCRAKHLPSASIINTDAPPDHDGNGEGFAPTDLLASSLGTCILTVMGIHSRRK GWDLGRAHALVRKTMSAEQPRKIESLDVDVHLPPGLTAEQIVFLKQAAQDCPVMRSLSDDLVVHLKWIVEV
Sequences:
>Translated_151_residues MRACAADLDPLIRGFMTLIQCFYAGNLHCRAKHLPSASIINTDAPPDHDGNGEGFAPTDLLASSLGTCILTVMGIHSRRK GWDLGRAHALVRKTMSAEQPRKIESLDVDVHLPPGLTAEQIVFLKQAAQDCPVMRSLSDDLVVHLKWIVEV >Mature_151_residues MRACAADLDPLIRGFMTLIQCFYAGNLHCRAKHLPSASIINTDAPPDHDGNGEGFAPTDLLASSLGTCILTVMGIHSRRK GWDLGRAHALVRKTMSAEQPRKIESLDVDVHLPPGLTAEQIVFLKQAAQDCPVMRSLSDDLVVHLKWIVEV
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16507; Mature: 16507
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRACAADLDPLIRGFMTLIQCFYAGNLHCRAKHLPSASIINTDAPPDHDGNGEGFAPTDL CCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCHHHH LASSLGTCILTVMGIHSRRKGWDLGRAHALVRKTMSAEQPRKIESLDVDVHLPPGLTAEQ HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHH IVFLKQAAQDCPVMRSLSDDLVVHLKWIVEV HHHHHHHHHCCHHHHHCCHHHHHHHHHEECC >Mature Secondary Structure MRACAADLDPLIRGFMTLIQCFYAGNLHCRAKHLPSASIINTDAPPDHDGNGEGFAPTDL CCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCHHHH LASSLGTCILTVMGIHSRRKGWDLGRAHALVRKTMSAEQPRKIESLDVDVHLPPGLTAEQ HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHH IVFLKQAAQDCPVMRSLSDDLVVHLKWIVEV HHHHHHHHHCCHHHHHCCHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA