Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is 148242129

Identifier: 148242129

GI number: 148242129

Start: 940528

End: 940689

Strand: Direct

Name: 148242129

Synonym: SynRCC307_1030

Alternate gene names: NA

Gene position: 940528-940689 (Clockwise)

Preceding gene: 148242128

Following gene: 148242131

Centisome position: 42.27

GC content: 53.09

Gene sequence:

>162_bases
ATGGATTGGCTGATTAAACCGATCAGAGCTGTCGTCTTGGCAGACCGTGATGCCTACTTCTGGATCAAAGACCGACTCAA
GCTGGGTGAATACCAGATGGCCGCATTGGTCTGGTTCTCAGCCTGCATCTTTGGATTCCTGCTCGGCTGGTGGCTGACCT
AG

Upstream 100 bases:

>100_bases
TGCACTTTTAAGCACCTGTCCATTTGGTGTGGCGACTCCCGTTTGGGTGAATTGCACCGCGCCTACAACAGAGGGGAAAC
CGTGAACTCTGACAAACCCA

Downstream 100 bases:

>100_bases
CCGAACGGTTAGCGGCGCCTGCTGGGGTCTTGCGGTTCCGCCGCGCTTTTGCGCTACACGCAACCTGTGCATCCTCTGTC
GGAGCCTGTTTCCTCTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MDWLIKPIRAVVLADRDAYFWIKDRLKLGEYQMAALVWFSACIFGFLLGWWLT

Sequences:

>Translated_53_residues
MDWLIKPIRAVVLADRDAYFWIKDRLKLGEYQMAALVWFSACIFGFLLGWWLT
>Mature_53_residues
MDWLIKPIRAVVLADRDAYFWIKDRLKLGEYQMAALVWFSACIFGFLLGWWLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6339; Mature: 6339

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWLIKPIRAVVLADRDAYFWIKDRLKLGEYQMAALVWFSACIFGFLLGWWLT
CCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDWLIKPIRAVVLADRDAYFWIKDRLKLGEYQMAALVWFSACIFGFLLGWWLT
CCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA