Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242125

Identifier: 148242125

GI number: 148242125

Start: 938163

End: 938660

Strand: Direct

Name: 148242125

Synonym: SynRCC307_1026

Alternate gene names: NA

Gene position: 938163-938660 (Clockwise)

Preceding gene: 148242119

Following gene: 148242127

Centisome position: 42.17

GC content: 58.03

Gene sequence:

>498_bases
TTGCCTCCCCCGTTGTTTGGTATGGCCCGTCCCAGCCTTTATCTGGCCTCTCCCTATGGCTTCGCGCCGCAATGGAAAGA
GCAGCTTTTGCCGCAGTTCTGCCAGGCCCTTGAGTCATTAGGTGCCGATGTGTGGGAGCCCTTTGAGCGCAACAACCAAA
TTGATCTGAGCAAGCCTGGTTGGGCTTATCAGGTGGCATGCGCGGATGTGCGTGACGTGGAGCAGGCCGATGGATTTTTT
GCGATCGTCAATGGAACGCCCCCCGATGAGGGGGTGATGGTGGAGCTGGGAATCGCCATTGCGCTCCACAAGCCGATTTT
TTTGTTTCGAGATGATTTCCGGGTCTGCAGCGATTCTGAGGACTACCCGCTCAACCTGATGCTGTTTGCCGGCCTGCCTG
AACACAGCTGGCGCGACCACTTCTACAGCTCCATCGCCGACTTGGCTGATCCAGCCAAAGCCTTGGTGCGCTGGCTCAGC
TCTGCTGGCGCTCGCTGA

Upstream 100 bases:

>100_bases
TGTCCACATGCTCAATCTGGTCTCGCATGTGCCATGTCACAAGCCGTTCTTAACCCAGCTTCTTGCTTCTTAGCTGTCCT
TCATTGTTGAAGCGCCAGCT

Downstream 100 bases:

>100_bases
GGTCGGCCAGCAGGTTCAGCAGGGTGTCGAGTTCGCGCACTTCGCAGTAGCGATCCCAGTTATCGCAAGTGATGACGCTG
CGAAATTCCCGGAAGGCCTC

Product: nucleoside 2-deoxyribosyltransferase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPPPLFGMARPSLYLASPYGFAPQWKEQLLPQFCQALESLGADVWEPFERNNQIDLSKPGWAYQVACADVRDVEQADGFF
AIVNGTPPDEGVMVELGIAIALHKPIFLFRDDFRVCSDSEDYPLNLMLFAGLPEHSWRDHFYSSIADLADPAKALVRWLS
SAGAR

Sequences:

>Translated_165_residues
MPPPLFGMARPSLYLASPYGFAPQWKEQLLPQFCQALESLGADVWEPFERNNQIDLSKPGWAYQVACADVRDVEQADGFF
AIVNGTPPDEGVMVELGIAIALHKPIFLFRDDFRVCSDSEDYPLNLMLFAGLPEHSWRDHFYSSIADLADPAKALVRWLS
SAGAR
>Mature_164_residues
PPPLFGMARPSLYLASPYGFAPQWKEQLLPQFCQALESLGADVWEPFERNNQIDLSKPGWAYQVACADVRDVEQADGFFA
IVNGTPPDEGVMVELGIAIALHKPIFLFRDDFRVCSDSEDYPLNLMLFAGLPEHSWRDHFYSSIADLADPAKALVRWLSS
AGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18448; Mature: 18317

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPPLFGMARPSLYLASPYGFAPQWKEQLLPQFCQALESLGADVWEPFERNNQIDLSKPG
CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCCCC
WAYQVACADVRDVEQADGFFAIVNGTPPDEGVMVELGIAIALHKPIFLFRDDFRVCSDSE
CEEEEEECCHHHHHHCCCEEEEECCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCCCC
DYPLNLMLFAGLPEHSWRDHFYSSIADLADPAKALVRWLSSAGAR
CCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PPPLFGMARPSLYLASPYGFAPQWKEQLLPQFCQALESLGADVWEPFERNNQIDLSKPG
CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCCCC
WAYQVACADVRDVEQADGFFAIVNGTPPDEGVMVELGIAIALHKPIFLFRDDFRVCSDSE
CEEEEEECCHHHHHHCCCEEEEECCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCCCC
DYPLNLMLFAGLPEHSWRDHFYSSIADLADPAKALVRWLSSAGAR
CCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA