| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is glcK [H]
Identifier: 148242024
GI number: 148242024
Start: 850655
End: 851572
Strand: Direct
Name: glcK [H]
Synonym: SynRCC307_0925
Alternate gene names: 148242024
Gene position: 850655-851572 (Clockwise)
Preceding gene: 148242023
Following gene: 148242025
Centisome position: 38.23
GC content: 65.58
Gene sequence:
>918_bases GTGGTGGTGATGGCGAAGCCGCACCGTCAGGTGATCGGGGTGGATATCGGTGGCACTGGCCTCAAGCTGGGTCGTTTTGA TAGCGACGGCCAGCTCTTGGCGGAGCAGCTCTGCCCGACACCCCAACCACCCGCCCCCGGTGCCATCACAACGGCGCTGG TGGAAGCCATTGAGGCCCTTGATCCAGAGCGTCAAGCCGATGCGGTTGGTGTGGGGCTGCCCGGCCCGATGGACCGCAGC GCCCGGGTGGCTCAGGTCTGCATCAATCTCCCGGGTTGGCAGCACGTTCCGTTGGCCGAGTGGCTGGAGGCACGCCTGCA GCGCCCGGTCACGTTGGCCAACGATGGCAATTGCGCTGTGCTCGGTGAGCAGTGGCTTGGCGCTGCCAAAGGAATCGATG ACGTGGTGCTGTTGACCCTGGGCACCGGCGTTGGTGGCGGGGTGATCCTTGGCGGCCAGCTCTTTCTTGGTCGCCGCGGT GCTGCCGCTGAACCTGGATTGATTGGCCTGGATCCGGCAGGCCCGCCATGCAACAGCGGCAACAACGGTTCGATCGAGAC GTTTTGCAGCATTGGTGCCCTCACCCGTTGGGCTGGCTGCCCCCCCGATGAGCTCTCCAGGCGCGCCACAAACGGCGATG CGGAAGCCCTTGAGGCTTGGCAGCGCTATGGCCAGCTTTTGGGCTGCGGCATCAGCTCGTTGGTCTATGCCTTCACCCCC GAGCGCGTGTTGTTGGGGGGCGGCCTCAGCGCTGCATTTCCCTTTTTTGCCGGCAGTCTTCAGCAGGAGGTGGAGAGCCG AGTGCTGGCTCCAAGCCGCCAGGATCTGGTGATTGCACCGGCCAGCTTGGGCAATGGGGCTGGCCGCTTGGGCGCGGCTC GCTTGGCGTTGGAGCGTCTGCCAGGCCGCCAGGGATGA
Upstream 100 bases:
>100_bases TGGGTGTGCAGGGCGCCCTCGACCAACAGGGGCGCTGGCAGGGACAGCTGCAATTGTTCTTCCGCTTCTAGCCCTGCTCA GGCTTAATGGAGGCAGTGGA
Downstream 100 bases:
>100_bases TGCATGGCAGTCCCCCTGCCCAGGCGTTGAATCAGGCCGTTCCCGATCCCTCCCCTGAACTGCTGGCCCGCGCTTCGAGC CTGAGGCGCCATGCCATTGA
Product: ROK family protein
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MVVMAKPHRQVIGVDIGGTGLKLGRFDSDGQLLAEQLCPTPQPPAPGAITTALVEAIEALDPERQADAVGVGLPGPMDRS ARVAQVCINLPGWQHVPLAEWLEARLQRPVTLANDGNCAVLGEQWLGAAKGIDDVVLLTLGTGVGGGVILGGQLFLGRRG AAAEPGLIGLDPAGPPCNSGNNGSIETFCSIGALTRWAGCPPDELSRRATNGDAEALEAWQRYGQLLGCGISSLVYAFTP ERVLLGGGLSAAFPFFAGSLQQEVESRVLAPSRQDLVIAPASLGNGAGRLGAARLALERLPGRQG
Sequences:
>Translated_305_residues MVVMAKPHRQVIGVDIGGTGLKLGRFDSDGQLLAEQLCPTPQPPAPGAITTALVEAIEALDPERQADAVGVGLPGPMDRS ARVAQVCINLPGWQHVPLAEWLEARLQRPVTLANDGNCAVLGEQWLGAAKGIDDVVLLTLGTGVGGGVILGGQLFLGRRG AAAEPGLIGLDPAGPPCNSGNNGSIETFCSIGALTRWAGCPPDELSRRATNGDAEALEAWQRYGQLLGCGISSLVYAFTP ERVLLGGGLSAAFPFFAGSLQQEVESRVLAPSRQDLVIAPASLGNGAGRLGAARLALERLPGRQG >Mature_305_residues MVVMAKPHRQVIGVDIGGTGLKLGRFDSDGQLLAEQLCPTPQPPAPGAITTALVEAIEALDPERQADAVGVGLPGPMDRS ARVAQVCINLPGWQHVPLAEWLEARLQRPVTLANDGNCAVLGEQWLGAAKGIDDVVLLTLGTGVGGGVILGGQLFLGRRG AAAEPGLIGLDPAGPPCNSGNNGSIETFCSIGALTRWAGCPPDELSRRATNGDAEALEAWQRYGQLLGCGISSLVYAFTP ERVLLGGGLSAAFPFFAGSLQQEVESRVLAPSRQDLVIAPASLGNGAGRLGAARLALERLPGRQG
Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566315, Length=266, Percent_Identity=30.8270676691729, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI298566325, Length=266, Percent_Identity=30.8270676691729, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI190014632, Length=266, Percent_Identity=30.8270676691729, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI4885285, Length=266, Percent_Identity=30.8270676691729, Blast_Score=84, Evalue=1e-16, Organism=Escherichia coli, GI1786891, Length=305, Percent_Identity=25.2459016393443, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1787363, Length=304, Percent_Identity=33.2236842105263, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI87081733, Length=299, Percent_Identity=30.4347826086957, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1787878, Length=248, Percent_Identity=27.4193548387097, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790522, Length=306, Percent_Identity=30.3921568627451, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI87082230, Length=252, Percent_Identity=30.1587301587302, Blast_Score=68, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 31441; Mature: 31441
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVMAKPHRQVIGVDIGGTGLKLGRFDSDGQLLAEQLCPTPQPPAPGAITTALVEAIEAL CEEECCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC DPERQADAVGVGLPGPMDRSARVAQVCINLPGWQHVPLAEWLEARLQRPVTLANDGNCAV CCCHHHCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEECCCCEEE LGEQWLGAAKGIDDVVLLTLGTGVGGGVILGGQLFLGRRGAAAEPGLIGLDPAGPPCNSG ECHHHHHHHCCCCCEEEEEECCCCCCCEEECCEEEECCCCCCCCCCEEECCCCCCCCCCC NNGSIETFCSIGALTRWAGCPPDELSRRATNGDAEALEAWQRYGQLLGCGISSLVYAFTP CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCC ERVLLGGGLSAAFPFFAGSLQQEVESRVLAPSRQDLVIAPASLGNGAGRLGAARLALERL CEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHC PGRQG CCCCC >Mature Secondary Structure MVVMAKPHRQVIGVDIGGTGLKLGRFDSDGQLLAEQLCPTPQPPAPGAITTALVEAIEAL CEEECCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC DPERQADAVGVGLPGPMDRSARVAQVCINLPGWQHVPLAEWLEARLQRPVTLANDGNCAV CCCHHHCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEECCCCEEE LGEQWLGAAKGIDDVVLLTLGTGVGGGVILGGQLFLGRRGAAAEPGLIGLDPAGPPCNSG ECHHHHHHHCCCCCEEEEEECCCCCCCEEECCEEEECCCCCCCCCCEEECCCCCCCCCCC NNGSIETFCSIGALTRWAGCPPDELSRRATNGDAEALEAWQRYGQLLGCGISSLVYAFTP CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCC ERVLLGGGLSAAFPFFAGSLQQEVESRVLAPSRQDLVIAPASLGNGAGRLGAARLALERL CEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHC PGRQG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]