| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241999
Identifier: 148241999
GI number: 148241999
Start: 817312
End: 817602
Strand: Direct
Name: 148241999
Synonym: SynRCC307_0900
Alternate gene names: NA
Gene position: 817312-817602 (Clockwise)
Preceding gene: 148241998
Following gene: 148242000
Centisome position: 36.73
GC content: 59.79
Gene sequence:
>291_bases ATGGCCGCCCATTTGCTCAGCACGACCGAGTGCGACGCCCTGCTGGCTCAACGGCCCCACTGGTCTGTGCAGCAGGGCAA GTTGCACCGGGATCTGCAATTTGCTGATTTTTCTGAGGCTTTTGGCTTCATGGCGCGGGTGGCGCTGCTGGCCGAAGCCA TGGGCCATCACCCGGAATGGAGCAACGTTTGGAACCGGGTCAGCATTGATCTGGTCACCCATGACTTGGGCGGTATCTCC AGCCTTGATCAACAGATGGCTGAGCGCATTGATGCAATGGCCGCCGGCTGA
Upstream 100 bases:
>100_bases GGCTCCCAGGTGGGATGTCCGGTGGCCCAGGGCCAGGGACCCTTCGGTGGGCTTGGTTATTAATGGCTGGCTAGAAACGG CCTAAAGCTGCATTGGCTTG
Downstream 100 bases:
>100_bases TCAGGCAAACCATGCAGTTCCGCGTCGATGCTGAGATTCAAGCGTTAACACGGGATCTGCAAGCCCTGGCCATGGATCAC CGCATTGTGGTGTGCACCAA
Product: putative pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MAAHLLSTTECDALLAQRPHWSVQQGKLHRDLQFADFSEAFGFMARVALLAEAMGHHPEWSNVWNRVSIDLVTHDLGGIS SLDQQMAERIDAMAAG
Sequences:
>Translated_96_residues MAAHLLSTTECDALLAQRPHWSVQQGKLHRDLQFADFSEAFGFMARVALLAEAMGHHPEWSNVWNRVSIDLVTHDLGGIS SLDQQMAERIDAMAAG >Mature_95_residues AAHLLSTTECDALLAQRPHWSVQQGKLHRDLQFADFSEAFGFMARVALLAEAMGHHPEWSNVWNRVSIDLVTHDLGGISS LDQQMAERIDAMAAG
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI4557831, Length=96, Percent_Identity=44.7916666666667, Blast_Score=80, Evalue=3e-16, Organism=Homo sapiens, GI134133240, Length=68, Percent_Identity=48.5294117647059, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115533705, Length=76, Percent_Identity=48.6842105263158, Blast_Score=86, Evalue=4e-18, Organism=Drosophila melanogaster, GI45549100, Length=76, Percent_Identity=44.7368421052632, Blast_Score=79, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 10629; Mature: 10498
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAHLLSTTECDALLAQRPHWSVQQGKLHRDLQFADFSEAFGFMARVALLAEAMGHHPEW CCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH SNVWNRVSIDLVTHDLGGISSLDQQMAERIDAMAAG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAHLLSTTECDALLAQRPHWSVQQGKLHRDLQFADFSEAFGFMARVALLAEAMGHHPEW CCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH SNVWNRVSIDLVTHDLGGISSLDQQMAERIDAMAAG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA