| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is cya [H]
Identifier: 148241991
GI number: 148241991
Start: 808276
End: 810645
Strand: Direct
Name: cya [H]
Synonym: SynRCC307_0892
Alternate gene names: 148241991
Gene position: 808276-810645 (Clockwise)
Preceding gene: 148241988
Following gene: 148241992
Centisome position: 36.33
GC content: 48.57
Gene sequence:
>2370_bases ATGGCTTATTTTGTTGACTCTCAATACGAACACTACGGAACAGCACGAGCAACAGGAATCAACAGAGAACTAACTGAATC AGAACGAAGCGAAAATCAACTTCGGATCAATGCTGGAGCTACTTCAGACAATGGGGGCGGGACAGGAACCACAAATATTG CCATTGCTTCAGCAGTGCTCAATACGACACTTGATACCAGAGCGACAGACATTGACATCAGTGCAAGCGCTTGGGGCTAT GAGGCTTATTCATATGGACTATCGGGATCAACACTGAACGCAACAAACAATGCTGGCGTTGATTTGGATATTCAAACCCA CTCAACTGTTAGAGGGTACGATCCAGCTAATGGCCTAGACAATAGCCATATCTCAACTGGTGAAGGCAATGACAGAATTG AAATTCTAGCTTCAGCATCTGGGAGCTCACAGGGAGCGAATCTCCAAAGCAATCAGCAGCTTTTTGCTCGCGGCATGACC GCAGGCTCAAGCATCAATAGCGGTGGCGGTGATGACAATATAATTATCAATGCAAGTGCTGCTCAGCAATCATATTCAGC AAATGCAGTGTTGTCAGCAACTGGCGTTGAGCGATCAATGATTGACACTGGCGATGGCAATGACACTCTTCACATTCTTG CTTCTGCCTCGACTTATTACGGATCAGAATTAGGCGTTGGACTTTCCAGCTCTTCAGTTACACTTGGTTCGGGAGACGAC AATTTCTATCTGCATGGCAATTATGAGAACTCAAGCGTTGATGGTGGCACTGGCTTCGATACACTAACCCTCAGCAGAGG CACAGCTTCCTCGGTTGTTTCCAGGCAAGATGGGTCTTTGAGTGTAAGCAATGGGAATCAATCCCTGATTCTTCAAGGTA TTGAAAGGATTAACTTCGCCGACGGGACTAGCTATGAGGCGCCTCCAGCAAAGCCTGGTGTAACTGTTGAATATGGATCG ACCTTGATCTCGGAAAATGGCGATTCAACTACCATTTCATACAAACTCGACTCTCCGCCGTCGGAGACTGTTGCTATTTG GCTTCGCAACTCAGATACAGCGGAGGCAAGTCTAAGCCATGAATATCTTGAGTTTGATGCAACAAACTGGAATCAAGAGC AAGTTGTAACTGTTACGGGCCTAAGCGACAGGGAAGTCGACGGAGCGAAAGCTGCAACTATTACCCATGAAATTGTAAGC AATGACTTTGATTATGCCCCTCGTGCCGATGGCACTGGTGGTGTCGTCATCGAAAATATTGTATTCACAAACGCAGATGC AGATGAGCATCAAACTATTTATGGAGACCGAGAGGTAGGTAGGTATAATGATCGACTAATTGGCGAGGACGGAAATGATC GGATTTACGGCGGATGGGGTCGTGATCAAGTTAATAGTGGCTGGGGTGGCGATCGAATTTATGGTGGCTATGACGACGAC GTCCTTTACGGCGAAGAGGGTAATGATCAGCTTTATGGAGAGGCGGATGACGATCGCCTCTTTGGAGGCAGCGGCAATGA CGTCCTAAATGGTGGTACTGGCGCCGACTACATGAGTGGCGGAGCTGGCAATGACACTTATTACGTTGACAATGAAAACG ATATTATTGATGATCGTGGCTTGTCTTCCGATGTAGATACGGTCGTTCTACAAGGAGCTGTTCGATTCACCCTTGGTAAT GGTATTGAGAGTGCTGTGGGGAATAATGCTAATAACACTCTCAATGGAAACTCATCAAATAACAACCTTGATGGGGGGGC GGGAAACGACAGCCTTCAAGGCGCCAGTGGGAATGATCAACTCATTGGTGGTGCCGGGAATGACACGCTTAATGGTGGCT CTGGTCGGGACACAGCTGTGTTTCATGGCCAGTCCAATCGCATCAACCTCAACATATCTGGTTGGCAAAACACGAGAGAA GGTCGTGATCGCTTGGTCTCTATTGAGAGCGTTAATGCAGGAGGCGGCAATGATGTTGTGACTGGCAACCGTGGCAACAA CACTCTTAGTGGCCAAAGTGGTAATGATTCACTGAGAGGAGCGGCTGGCAGCGATTACTTATTGGGGGGCAACGGCAGCG ACAGGCTTATCGGTGGCTCCGGTAATGACAGGCTTGTTGGTGGGTCTGGTAATGACAGGCTTGTTGGTGGCTCTGGTCGT GACACCTTTGTTCTCTCTGAGGGCGCTGGCTATGATCGCATCTCGGACTTCCGTAATGGCCAAGACCGCATTCAAGTAGG CGCTGGTGTTGACAACCTGCGAGTTCAAAATCGCAATGGCCATGCCTACGTCTATGAAGGACGGGATCTGATGGCTGTGG TCCAAGGCGGTGCAGGTGACTTGCAGGAAAGGGGAAACTTCCTGATCTGA
Upstream 100 bases:
>100_bases AGGTCAAGAGGCAAAAAAACAATTTGAGTGACATCAAGTTGATGCCAATTGACTGATTGAAACAATCATTTTCCTCAACA GCATTCTGGAGGGTTTTAAA
Downstream 100 bases:
>100_bases TCCAACTCGGCAGAACTATCCACGGCCCCTGCTTCGGTAGGGGCTTTTATTTGGGAGATTGGATGGAGATCGGCTGATAT CGCTCTCTGGCACACGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: AC-HLY; ACT; Cyclolysin; ATP pyrophosphate-lyase; Adenylyl cyclase [H]
Number of amino acids: Translated: 789; Mature: 788
Protein sequence:
>789_residues MAYFVDSQYEHYGTARATGINRELTESERSENQLRINAGATSDNGGGTGTTNIAIASAVLNTTLDTRATDIDISASAWGY EAYSYGLSGSTLNATNNAGVDLDIQTHSTVRGYDPANGLDNSHISTGEGNDRIEILASASGSSQGANLQSNQQLFARGMT AGSSINSGGGDDNIIINASAAQQSYSANAVLSATGVERSMIDTGDGNDTLHILASASTYYGSELGVGLSSSSVTLGSGDD NFYLHGNYENSSVDGGTGFDTLTLSRGTASSVVSRQDGSLSVSNGNQSLILQGIERINFADGTSYEAPPAKPGVTVEYGS TLISENGDSTTISYKLDSPPSETVAIWLRNSDTAEASLSHEYLEFDATNWNQEQVVTVTGLSDREVDGAKAATITHEIVS NDFDYAPRADGTGGVVIENIVFTNADADEHQTIYGDREVGRYNDRLIGEDGNDRIYGGWGRDQVNSGWGGDRIYGGYDDD VLYGEEGNDQLYGEADDDRLFGGSGNDVLNGGTGADYMSGGAGNDTYYVDNENDIIDDRGLSSDVDTVVLQGAVRFTLGN GIESAVGNNANNTLNGNSSNNNLDGGAGNDSLQGASGNDQLIGGAGNDTLNGGSGRDTAVFHGQSNRINLNISGWQNTRE GRDRLVSIESVNAGGGNDVVTGNRGNNTLSGQSGNDSLRGAAGSDYLLGGNGSDRLIGGSGNDRLVGGSGNDRLVGGSGR DTFVLSEGAGYDRISDFRNGQDRIQVGAGVDNLRVQNRNGHAYVYEGRDLMAVVQGGAGDLQERGNFLI
Sequences:
>Translated_789_residues MAYFVDSQYEHYGTARATGINRELTESERSENQLRINAGATSDNGGGTGTTNIAIASAVLNTTLDTRATDIDISASAWGY EAYSYGLSGSTLNATNNAGVDLDIQTHSTVRGYDPANGLDNSHISTGEGNDRIEILASASGSSQGANLQSNQQLFARGMT AGSSINSGGGDDNIIINASAAQQSYSANAVLSATGVERSMIDTGDGNDTLHILASASTYYGSELGVGLSSSSVTLGSGDD NFYLHGNYENSSVDGGTGFDTLTLSRGTASSVVSRQDGSLSVSNGNQSLILQGIERINFADGTSYEAPPAKPGVTVEYGS TLISENGDSTTISYKLDSPPSETVAIWLRNSDTAEASLSHEYLEFDATNWNQEQVVTVTGLSDREVDGAKAATITHEIVS NDFDYAPRADGTGGVVIENIVFTNADADEHQTIYGDREVGRYNDRLIGEDGNDRIYGGWGRDQVNSGWGGDRIYGGYDDD VLYGEEGNDQLYGEADDDRLFGGSGNDVLNGGTGADYMSGGAGNDTYYVDNENDIIDDRGLSSDVDTVVLQGAVRFTLGN GIESAVGNNANNTLNGNSSNNNLDGGAGNDSLQGASGNDQLIGGAGNDTLNGGSGRDTAVFHGQSNRINLNISGWQNTRE GRDRLVSIESVNAGGGNDVVTGNRGNNTLSGQSGNDSLRGAAGSDYLLGGNGSDRLIGGSGNDRLVGGSGNDRLVGGSGR DTFVLSEGAGYDRISDFRNGQDRIQVGAGVDNLRVQNRNGHAYVYEGRDLMAVVQGGAGDLQERGNFLI >Mature_788_residues AYFVDSQYEHYGTARATGINRELTESERSENQLRINAGATSDNGGGTGTTNIAIASAVLNTTLDTRATDIDISASAWGYE AYSYGLSGSTLNATNNAGVDLDIQTHSTVRGYDPANGLDNSHISTGEGNDRIEILASASGSSQGANLQSNQQLFARGMTA GSSINSGGGDDNIIINASAAQQSYSANAVLSATGVERSMIDTGDGNDTLHILASASTYYGSELGVGLSSSSVTLGSGDDN FYLHGNYENSSVDGGTGFDTLTLSRGTASSVVSRQDGSLSVSNGNQSLILQGIERINFADGTSYEAPPAKPGVTVEYGST LISENGDSTTISYKLDSPPSETVAIWLRNSDTAEASLSHEYLEFDATNWNQEQVVTVTGLSDREVDGAKAATITHEIVSN DFDYAPRADGTGGVVIENIVFTNADADEHQTIYGDREVGRYNDRLIGEDGNDRIYGGWGRDQVNSGWGGDRIYGGYDDDV LYGEEGNDQLYGEADDDRLFGGSGNDVLNGGTGADYMSGGAGNDTYYVDNENDIIDDRGLSSDVDTVVLQGAVRFTLGNG IESAVGNNANNTLNGNSSNNNLDGGAGNDSLQGASGNDQLIGGAGNDTLNGGSGRDTAVFHGQSNRINLNISGWQNTREG RDRLVSIESVNAGGGNDVVTGNRGNNTLSGQSGNDSLRGAAGSDYLLGGNGSDRLIGGSGNDRLVGGSGNDRLVGGSGRD TFVLSEGAGYDRISDFRNGQDRIQVGAGVDNLRVQNRNGHAYVYEGRDLMAVVQGGAGDLQERGNFLI
Specific function: This adenylate cyclase belongs to a special class of bacterial toxin. It causes whooping cough by acting on mammalian cells by elevating cAMP-concentration and thus disrupts normal cell function [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 17 hemolysin-type calcium-binding repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005165 - InterPro: IPR018511 - InterPro: IPR001343 - InterPro: IPR018504 - InterPro: IPR003995 - InterPro: IPR011049 [H]
Pfam domain/function: PF03497 Anthrax_toxA; PF00353 HemolysinCabind; PF02382 RTX [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 82173; Mature: 82042
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: PS00330 HEMOLYSIN_CALCIUM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYFVDSQYEHYGTARATGINRELTESERSENQLRINAGATSDNGGGTGTTNIAIASAVL CEEEECCCHHHCCCEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHEEEHHHH NTTLDTRATDIDISASAWGYEAYSYGLSGSTLNATNNAGVDLDIQTHSTVRGYDPANGLD HCCCCCCCEEEEEECCCCCCEEEEECCCCCEECCCCCCCEEEEEECCCEECCCCCCCCCC NSHISTGEGNDRIEILASASGSSQGANLQSNQQLFARGMTAGSSINSGGGDDNIIINASA CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECC AQQSYSANAVLSATGVERSMIDTGDGNDTLHILASASTYYGSELGVGLSSSSVTLGSGDD CCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEECCEECCCHHCCCCCCCEEEECCCCC NFYLHGNYENSSVDGGTGFDTLTLSRGTASSVVSRQDGSLSVSNGNQSLILQGIERINFA CEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCEEECCCCCEEEEEHHHHCCCC DGTSYEAPPAKPGVTVEYGSTLISENGDSTTISYKLDSPPSETVAIWLRNSDTAEASLSH CCCCCCCCCCCCCEEEECCCEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHCCC EYLEFDATNWNQEQVVTVTGLSDREVDGAKAATITHEIVSNDFDYAPRADGTGGVVIENI EEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCEEEEEE VFTNADADEHQTIYGDREVGRYNDRLIGEDGNDRIYGGWGRDQVNSGWGGDRIYGGYDDD EEECCCCCCCEEEECCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCEECCCCCC VLYGEEGNDQLYGEADDDRLFGGSGNDVLNGGTGADYMSGGAGNDTYYVDNENDIIDDRG EEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHCCCCCCCCCEEECCCCCEECCCC LSSDVDTVVLQGAVRFTLGNGIESAVGNNANNTLNGNSSNNNLDGGAGNDSLQGASGNDQ CCCCHHHEEEECEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LIGGAGNDTLNGGSGRDTAVFHGQSNRINLNISGWQNTREGRDRLVSIESVNAGGGNDVV EEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHEEEEEEEECCCCCCCEE TGNRGNNTLSGQSGNDSLRGAAGSDYLLGGNGSDRLIGGSGNDRLVGGSGNDRLVGGSGR ECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCEEECCCCCCEEECCCCC DTFVLSEGAGYDRISDFRNGQDRIQVGAGVDNLRVQNRNGHAYVYEGRDLMAVVQGGAGD CEEEEECCCCCHHHHHHCCCCCEEEECCCCCCEEEECCCCCEEEECCCEEEEEEECCCCC LQERGNFLI HHHCCCCCC >Mature Secondary Structure AYFVDSQYEHYGTARATGINRELTESERSENQLRINAGATSDNGGGTGTTNIAIASAVL EEEECCCHHHCCCEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHEEEHHHH NTTLDTRATDIDISASAWGYEAYSYGLSGSTLNATNNAGVDLDIQTHSTVRGYDPANGLD HCCCCCCCEEEEEECCCCCCEEEEECCCCCEECCCCCCCEEEEEECCCEECCCCCCCCCC NSHISTGEGNDRIEILASASGSSQGANLQSNQQLFARGMTAGSSINSGGGDDNIIINASA CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECC AQQSYSANAVLSATGVERSMIDTGDGNDTLHILASASTYYGSELGVGLSSSSVTLGSGDD CCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEECCEECCCHHCCCCCCCEEEECCCCC NFYLHGNYENSSVDGGTGFDTLTLSRGTASSVVSRQDGSLSVSNGNQSLILQGIERINFA CEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCEEECCCCCEEEEEHHHHCCCC DGTSYEAPPAKPGVTVEYGSTLISENGDSTTISYKLDSPPSETVAIWLRNSDTAEASLSH CCCCCCCCCCCCCEEEECCCEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHCCC EYLEFDATNWNQEQVVTVTGLSDREVDGAKAATITHEIVSNDFDYAPRADGTGGVVIENI EEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCEEEEEE VFTNADADEHQTIYGDREVGRYNDRLIGEDGNDRIYGGWGRDQVNSGWGGDRIYGGYDDD EEECCCCCCCEEEECCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCEECCCCCC VLYGEEGNDQLYGEADDDRLFGGSGNDVLNGGTGADYMSGGAGNDTYYVDNENDIIDDRG EEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHCCCCCCCCCEEECCCCCEECCCC LSSDVDTVVLQGAVRFTLGNGIESAVGNNANNTLNGNSSNNNLDGGAGNDSLQGASGNDQ CCCCHHHEEEECEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LIGGAGNDTLNGGSGRDTAVFHGQSNRINLNISGWQNTREGRDRLVSIESVNAGGGNDVV EEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHEEEEEEEECCCCCCCEE TGNRGNNTLSGQSGNDSLRGAAGSDYLLGGNGSDRLIGGSGNDRLVGGSGNDRLVGGSGR ECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCEEECCCCCCEEECCCCC DTFVLSEGAGYDRISDFRNGQDRIQVGAGVDNLRVQNRNGHAYVYEGRDLMAVVQGGAGD CEEEEECCCCCHHHHHHCCCCCEEEECCCCCCEEEECCCCCEEEECCCEEEEEEECCCCC LQERGNFLI HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7557410; 12910271 [H]