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The map label for this gene is 148241982

Identifier: 148241982

GI number: 148241982

Start: 800665

End: 801189

Strand: Direct

Name: 148241982

Synonym: SynRCC307_0883

Alternate gene names: NA

Gene position: 800665-801189 (Clockwise)

Preceding gene: 148241979

Following gene: 148241984

Centisome position: 35.99

GC content: 64.76

Gene sequence:

>525_bases
ATGGCACTGGCTCCACTGGCTTGCATGGGTGAGGATGGGCGCCACAACGCCGCGATCGACGTGAATCACTGCCTGCTCGA
GGTGGAAGTGCTGGGGGCGCCCACGATCCGATACACCCAAGACAACCAGATGCCGATTGCCGAGATGCAGGTTCGCATCG
ATGGTTTGCGGGCCGAAGATCCCTCTGGTGAGCTCAAGGTGGTGGGTTTTGGCAGCCTGGCTCAGGACCTGCAAAGCCGC
GTGCAAGTGGGCCAACGCTTGGTGCTCGAAGGCCGGCTGCGTATGAACACCACGGCCCGCGCAGATGGCATCAAAGAGAA
AAAAGCCGAATTCACCCTCTCCCGCATGCACCCGGTGGCTGGTGGTGGAGCTCCGGCTCCGGCCCCCAGCGCCGCCTCTG
CGCCTGCCGCGGCTCCAGCTCCTCAGGCCGCCCCCGCTCGCGCCTCTGCTCCTGCTGCAGCTGAAGCGCCTAGCTGGAAC
ACCGGCCCGCTGGTGGACCTCCCCGACGATGAGATTCCCTTCTAA

Upstream 100 bases:

>100_bases
CACCACGCTCACCCGCAGCTGCCATCCACGCCGCAACAACTCGGCGGCCAGGGGCGGCCCTTCCCCGGTGCCGCTGAGCA
GCCAGATGCGCTGCTCATCC

Downstream 100 bases:

>100_bases
GCAGGGAATCAAGGCTGAGAGATGTGCTGACTGGTTTGATCCAGGAGCTGCCCGAGTTCGCGCTCGAGAGCAGCCAGATC
AAGCCGTAGTTCGGGCCACT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: Thylakoid-associated SSB [H]

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MALAPLACMGEDGRHNAAIDVNHCLLEVEVLGAPTIRYTQDNQMPIAEMQVRIDGLRAEDPSGELKVVGFGSLAQDLQSR
VQVGQRLVLEGRLRMNTTARADGIKEKKAEFTLSRMHPVAGGGAPAPAPSAASAPAAAPAPQAAPARASAPAAAEAPSWN
TGPLVDLPDDEIPF

Sequences:

>Translated_174_residues
MALAPLACMGEDGRHNAAIDVNHCLLEVEVLGAPTIRYTQDNQMPIAEMQVRIDGLRAEDPSGELKVVGFGSLAQDLQSR
VQVGQRLVLEGRLRMNTTARADGIKEKKAEFTLSRMHPVAGGGAPAPAPSAASAPAAAPAPQAAPARASAPAAAEAPSWN
TGPLVDLPDDEIPF
>Mature_173_residues
ALAPLACMGEDGRHNAAIDVNHCLLEVEVLGAPTIRYTQDNQMPIAEMQVRIDGLRAEDPSGELKVVGFGSLAQDLQSRV
QVGQRLVLEGRLRMNTTARADGIKEKKAEFTLSRMHPVAGGGAPAPAPSAASAPAAAPAPQAAPARASAPAAAEAPSWNT
GPLVDLPDDEIPF

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18106; Mature: 17975

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAPLACMGEDGRHNAAIDVNHCLLEVEVLGAPTIRYTQDNQMPIAEMQVRIDGLRAED
CCCCCCEECCCCCCCCCEEEECCEEEEEEECCCCEEEECCCCCCCHHHEEEEECCEECCC
PSGELKVVGFGSLAQDLQSRVQVGQRLVLEGRLRMNTTARADGIKEKKAEFTLSRMHPVA
CCCCEEEEECCHHHHHHHHHHHHHHHEEECCCEEECCCHHCCCCHHHHHHHHHHHHCCCC
GGGAPAPAPSAASAPAAAPAPQAAPARASAPAAAEAPSWNTGPLVDLPDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
ALAPLACMGEDGRHNAAIDVNHCLLEVEVLGAPTIRYTQDNQMPIAEMQVRIDGLRAED
CCCCCEECCCCCCCCCEEEECCEEEEEEECCCCEEEECCCCCCCHHHEEEEECCEECCC
PSGELKVVGFGSLAQDLQSRVQVGQRLVLEGRLRMNTTARADGIKEKKAEFTLSRMHPVA
CCCCEEEEECCHHHHHHHHHHHHHHHEEECCCEEECCCHHCCCCHHHHHHHHHHHHCCCC
GGGAPAPAPSAASAPAAAPAPQAAPARASAPAAAEAPSWNTGPLVDLPDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]