| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241955
Identifier: 148241955
GI number: 148241955
Start: 778449
End: 779078
Strand: Direct
Name: 148241955
Synonym: SynRCC307_0856
Alternate gene names: NA
Gene position: 778449-779078 (Clockwise)
Preceding gene: 148241954
Following gene: 148241956
Centisome position: 34.99
GC content: 64.44
Gene sequence:
>630_bases ATGGCAACCTTCCTGAGGCCCCTGGCCTACCGGCATCGCTGGATTTACGACAGCGTCACGGCCATCAGCTCCCTCAGTGT TGGTGGTGTTGCTCGATTGCGGGCCCTGGGTCTCGAGGGCCTCAAGCAGCGCTTAGCTCCGGGCGCTGCTGTGCTGGATC TGTGCTGCGGCAGCGGCGAAGCGGCGGCTCCGTGGTTGCAGGCAGGTTTTGCGGTCACGGGCTTGGACATCGCGCCGCGG GCCTTGGATTTGGCCGCCCAGCGCTACCCCGCCCTGAAGAGGGTTCAGGGCCTAGCTGAAGATCCGCCGCTGCCAGACGG TCATTTCGCTGCGATTCAGCTCAGCGTGGCGCTGCATGAGTTCTCCCGCCCTGAGCGCGAGCAGGTGCTGCGCAGCTGCC TGCGCCTCTTGATGCCCGGAGGTTGGTTGGTGCTGGTGGATCTGCATCCGGCTGGCCCTTGGCTGCAGCTGCCGCAGCAG CTCTTTTGTGCCCTCTTTGAGACCCACACCGCCATTGCCATGCTGGAGGACAACCTGCCTGCCCAACTTGACGCGTTGGG CTTTATCGCTGTGGAGCAAGAGCTCCTGGCTGGTCAGGCGTTGCAACGCATCACAGCCCAGAGGCCATGA
Upstream 100 bases:
>100_bases GGTGGCCATTCACACCCGCACCTATCACCACTGGATTACCCGCCGTGATCAGCAGCAGGCCGTTGATGCCGCCTTGGCGC GGCGAAGCGCCTAACGAGCA
Downstream 100 bases:
>100_bases GCACACCCCCTGCCAACAGCAACCTGGATGCCACCGCGGCAGCCCTTGGGATGGGGGGTGAGCTGGCCCCTGAAAAAGAC GATGCCGCCTATCGCCAACG
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MATFLRPLAYRHRWIYDSVTAISSLSVGGVARLRALGLEGLKQRLAPGAAVLDLCCGSGEAAAPWLQAGFAVTGLDIAPR ALDLAAQRYPALKRVQGLAEDPPLPDGHFAAIQLSVALHEFSRPEREQVLRSCLRLLMPGGWLVLVDLHPAGPWLQLPQQ LFCALFETHTAIAMLEDNLPAQLDALGFIAVEQELLAGQALQRITAQRP
Sequences:
>Translated_209_residues MATFLRPLAYRHRWIYDSVTAISSLSVGGVARLRALGLEGLKQRLAPGAAVLDLCCGSGEAAAPWLQAGFAVTGLDIAPR ALDLAAQRYPALKRVQGLAEDPPLPDGHFAAIQLSVALHEFSRPEREQVLRSCLRLLMPGGWLVLVDLHPAGPWLQLPQQ LFCALFETHTAIAMLEDNLPAQLDALGFIAVEQELLAGQALQRITAQRP >Mature_208_residues ATFLRPLAYRHRWIYDSVTAISSLSVGGVARLRALGLEGLKQRLAPGAAVLDLCCGSGEAAAPWLQAGFAVTGLDIAPRA LDLAAQRYPALKRVQGLAEDPPLPDGHFAAIQLSVALHEFSRPEREQVLRSCLRLLMPGGWLVLVDLHPAGPWLQLPQQL FCALFETHTAIAMLEDNLPAQLDALGFIAVEQELLAGQALQRITAQRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 22626; Mature: 22494
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFLRPLAYRHRWIYDSVTAISSLSVGGVARLRALGLEGLKQRLAPGAAVLDLCCGSGE CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC AAAPWLQAGFAVTGLDIAPRALDLAAQRYPALKRVQGLAEDPPLPDGHFAAIQLSVALHE CCCHHHHHCCEEECCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH FSRPEREQVLRSCLRLLMPGGWLVLVDLHPAGPWLQLPQQLFCALFETHTAIAMLEDNLP CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC AQLDALGFIAVEQELLAGQALQRITAQRP CHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATFLRPLAYRHRWIYDSVTAISSLSVGGVARLRALGLEGLKQRLAPGAAVLDLCCGSGE CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC AAAPWLQAGFAVTGLDIAPRALDLAAQRYPALKRVQGLAEDPPLPDGHFAAIQLSVALHE CCCHHHHHCCEEECCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH FSRPEREQVLRSCLRLLMPGGWLVLVDLHPAGPWLQLPQQLFCALFETHTAIAMLEDNLP CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC AQLDALGFIAVEQELLAGQALQRITAQRP CHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]