| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is csoS3
Identifier: 148241921
GI number: 148241921
Start: 748591
End: 750126
Strand: Direct
Name: csoS3
Synonym: SynRCC307_0822
Alternate gene names: NA
Gene position: 748591-750126 (Clockwise)
Preceding gene: 148241920
Following gene: 148241922
Centisome position: 33.65
GC content: 61.78
Gene sequence:
>1536_bases ATGCGTGCCCGTCGCGGCAATGTTCAGCGCCCCATGGCACCGACGGCTCCGCGCCGTCGTCCTGCCATGGTGAGCAGCCT GGCCGACCGTGCTGGCGGAAACGCCGCTGCGCGTCGACCCAGCTCAGCTGTTTGGCCGCGTGATCAACACCCCCTGAGTG ATCCAACCCGTAATGCGGAGTTGCAGCGTTACGAGCAGGAGGTCAAAGGAGCGTTTGATCGCATCGTTCCGGTGCTGCAG CAGCTCTCGTTTCAGCAGCATGAACCCCGTTTTCCTGAGGTTGCTCAAGCCTTGGCCCATGCGGAGCTGGGCTTTGCCTT GCCGCAGCCGATCCTCGAGAACGCCTGGGTTGGTCAACTCGATATGCGCACTCTCTACGCGTGGTGCGTGTTTGAGACCT ACCAGCGCATCAGCGATCAGTTCTTTTCAGATGATCCTCTGGCGGGCAATCAAGGTGACGCCTTTGAGCAGTTCCTCTTC GACTGCGGCTTTCATCTGCTCGATATCACCCCCTGCGCCGATGGCCGCCTAGCCCATGCCATCGCCTACGCCCTGCGCAT TCCGCTGAGCTGCGTTCGCCGCCGCCCCCATGCCGGGGCCCTGTTTGACATTGAGGACACTGTTGAGCGCTGGGTCAAAA CCGAGCATCGCCGCTCCCGCGAGGGCTATCCCAACGCGGCCCATGACCCGACCCGCTACCTGAAGTGCGTCGTTTATCAC TTCAGTTCCATCGATCCCAGCCATGAGGGCTGCGCCGCCCATGGTTCCGATGACGGGCTCGCCGTCTCCGCTGGCATGGC ACGGCTCAAGGCCTTCCGTGAAGCTGTCGAAAAGGGCTTTTGTTGCGGGGCTTCCGTTGACCTGCTGTTGATCGGCCTTG ACACCGACACCGATGCCATTCGCGTGCACGTTCCCGATCGCGATGGCGAGGCTTCCCTGGATCAGTGGGTGGATGCCCGC GAGCTCTATGCCGAGACCCTTGGTTTGGATTCCGCCGCTGCCCGCGCCCACATCGCAGCAGCCGTGCAAGCCGGTTGCTC TGGGCCGACCGATCTCGGCATGAACCAATTCATTGCCCGTTTGATCGAGAACAACATTTCCCAGATCGACTACGTCAAAC AGTTCCACGGCGGGAACTACAGCGATGCCGGCCATGCCGAGCGCTTCATCGGTGTGGGCATTGGTTTTAAGGAGATTCAT CTGCGCAACCTCACCTACTTCGCCCACCTCGACACGGTGGAGGAGGGAGCTCCGGATCTCGATGTCGGCATCAAGATCTT CAGCGGTCTCAATGTCACCCGCGGACTGCCCATCCCCGTGGTGGTGCGTTTTGACTACCGCGGCAGTGTGCCGGGAGCCC GCGAGCGCGCCATCGCCAACGGTGAGCGGGTCATGGCGGCGATGCAAAACCGCTACAGCGATCTCTTTGAGAAGGGCCTG CTGCATCTGTTGCTGTCGGTCCGCGACCGCAACCACTTCGTGCCGTCTGAAACGGTACGGTCCACCATCACCATCCCCAC CCCAGGAGGTCACTGA
Upstream 100 bases:
>100_bases GCAACGACGAAGTTCCTTTGCCTGTGAGCCCGGTGACTGGTTCCAGCGGCAACACCGATAAGGGTTCTCTCATCACCGTT TCCGGTGGCGCACGCGGCTG
Downstream 100 bases:
>100_bases GCATGATCATCGTCAAGGTCATCAAGCCACTGGTCTCCACGAACCGGATTCCAGATTTTGAGCACAAGCACCTGCAGGTC GTTCAAGACGGCAGTTCCAA
Product: carboxysome shell polypeptide, CsoS3
Products: NA
Alternate protein names: Carboxysome Shell; Carboxysome Peptide; Carboxysome Shell Carbonic Anhydrase Epsilon
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MRARRGNVQRPMAPTAPRRRPAMVSSLADRAGGNAAARRPSSAVWPRDQHPLSDPTRNAELQRYEQEVKGAFDRIVPVLQ QLSFQQHEPRFPEVAQALAHAELGFALPQPILENAWVGQLDMRTLYAWCVFETYQRISDQFFSDDPLAGNQGDAFEQFLF DCGFHLLDITPCADGRLAHAIAYALRIPLSCVRRRPHAGALFDIEDTVERWVKTEHRRSREGYPNAAHDPTRYLKCVVYH FSSIDPSHEGCAAHGSDDGLAVSAGMARLKAFREAVEKGFCCGASVDLLLIGLDTDTDAIRVHVPDRDGEASLDQWVDAR ELYAETLGLDSAAARAHIAAAVQAGCSGPTDLGMNQFIARLIENNISQIDYVKQFHGGNYSDAGHAERFIGVGIGFKEIH LRNLTYFAHLDTVEEGAPDLDVGIKIFSGLNVTRGLPIPVVVRFDYRGSVPGARERAIANGERVMAAMQNRYSDLFEKGL LHLLLSVRDRNHFVPSETVRSTITIPTPGGH
Sequences:
>Translated_511_residues MRARRGNVQRPMAPTAPRRRPAMVSSLADRAGGNAAARRPSSAVWPRDQHPLSDPTRNAELQRYEQEVKGAFDRIVPVLQ QLSFQQHEPRFPEVAQALAHAELGFALPQPILENAWVGQLDMRTLYAWCVFETYQRISDQFFSDDPLAGNQGDAFEQFLF DCGFHLLDITPCADGRLAHAIAYALRIPLSCVRRRPHAGALFDIEDTVERWVKTEHRRSREGYPNAAHDPTRYLKCVVYH FSSIDPSHEGCAAHGSDDGLAVSAGMARLKAFREAVEKGFCCGASVDLLLIGLDTDTDAIRVHVPDRDGEASLDQWVDAR ELYAETLGLDSAAARAHIAAAVQAGCSGPTDLGMNQFIARLIENNISQIDYVKQFHGGNYSDAGHAERFIGVGIGFKEIH LRNLTYFAHLDTVEEGAPDLDVGIKIFSGLNVTRGLPIPVVVRFDYRGSVPGARERAIANGERVMAAMQNRYSDLFEKGL LHLLLSVRDRNHFVPSETVRSTITIPTPGGH >Mature_511_residues MRARRGNVQRPMAPTAPRRRPAMVSSLADRAGGNAAARRPSSAVWPRDQHPLSDPTRNAELQRYEQEVKGAFDRIVPVLQ QLSFQQHEPRFPEVAQALAHAELGFALPQPILENAWVGQLDMRTLYAWCVFETYQRISDQFFSDDPLAGNQGDAFEQFLF DCGFHLLDITPCADGRLAHAIAYALRIPLSCVRRRPHAGALFDIEDTVERWVKTEHRRSREGYPNAAHDPTRYLKCVVYH FSSIDPSHEGCAAHGSDDGLAVSAGMARLKAFREAVEKGFCCGASVDLLLIGLDTDTDAIRVHVPDRDGEASLDQWVDAR ELYAETLGLDSAAARAHIAAAVQAGCSGPTDLGMNQFIARLIENNISQIDYVKQFHGGNYSDAGHAERFIGVGIGFKEIH LRNLTYFAHLDTVEEGAPDLDVGIKIFSGLNVTRGLPIPVVVRFDYRGSVPGARERAIANGERVMAAMQNRYSDLFEKGL LHLLLSVRDRNHFVPSETVRSTITIPTPGGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56523; Mature: 56523
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARRGNVQRPMAPTAPRRRPAMVSSLADRAGGNAAARRPSSAVWPRDQHPLSDPTRNAE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHH LQRYEQEVKGAFDRIVPVLQQLSFQQHEPRFPEVAQALAHAELGFALPQPILENAWVGQL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCH DMRTLYAWCVFETYQRISDQFFSDDPLAGNQGDAFEQFLFDCGFHLLDITPCADGRLAHA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHH IAYALRIPLSCVRRRPHAGALFDIEDTVERWVKTEHRRSREGYPNAAHDPTRYLKCVVYH HHHHHHCCHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH FSSIDPSHEGCAAHGSDDGLAVSAGMARLKAFREAVEKGFCCGASVDLLLIGLDTDTDAI HHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEE RVHVPDRDGEASLDQWVDARELYAETLGLDSAAARAHIAAAVQAGCSGPTDLGMNQFIAR EEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LIENNISQIDYVKQFHGGNYSDAGHAERFIGVGIGFKEIHLRNLTYFAHLDTVEEGAPDL HHHCCHHHHHHHHHHCCCCCCCCCCHHHHEECCCCHHHHHHHCEEEEEECCHHHCCCCCC DVGIKIFSGLNVTRGLPIPVVVRFDYRGSVPGARERAIANGERVMAAMQNRYSDLFEKGL HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHLLLSVRDRNHFVPSETVRSTITIPTPGGH HHHHHHHHHCCCCCCCHHHCCEEEECCCCCC >Mature Secondary Structure MRARRGNVQRPMAPTAPRRRPAMVSSLADRAGGNAAARRPSSAVWPRDQHPLSDPTRNAE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHH LQRYEQEVKGAFDRIVPVLQQLSFQQHEPRFPEVAQALAHAELGFALPQPILENAWVGQL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCH DMRTLYAWCVFETYQRISDQFFSDDPLAGNQGDAFEQFLFDCGFHLLDITPCADGRLAHA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHH IAYALRIPLSCVRRRPHAGALFDIEDTVERWVKTEHRRSREGYPNAAHDPTRYLKCVVYH HHHHHHCCHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH FSSIDPSHEGCAAHGSDDGLAVSAGMARLKAFREAVEKGFCCGASVDLLLIGLDTDTDAI HHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEE RVHVPDRDGEASLDQWVDARELYAETLGLDSAAARAHIAAAVQAGCSGPTDLGMNQFIAR EEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LIENNISQIDYVKQFHGGNYSDAGHAERFIGVGIGFKEIHLRNLTYFAHLDTVEEGAPDL HHHCCHHHHHHHHHHCCCCCCCCCCHHHHEECCCCHHHHHHHCEEEEEECCHHHCCCCCC DVGIKIFSGLNVTRGLPIPVVVRFDYRGSVPGARERAIANGERVMAAMQNRYSDLFEKGL HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHLLLSVRDRNHFVPSETVRSTITIPTPGGH HHHHHHHHHCCCCCCCHHHCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA